ggKbase home page

L3_108_000G1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 318 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_8_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(99..572)
DNA (474bp) protein (158aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZ96_9FIRM
peptidase A8 signal peptidase II
L3_108_000G1_scaffold_8_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(544..2280)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22534.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Subtilase family.
L3_108_000G1_scaffold_8_3
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2362..3951)
DNA (1590bp) protein (530aa)
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) n=1 Tax=Clostridium sp. CAG:510 RepID=R6BVA0_9CLOT
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) {ECO:0000313|EMBL:CDA68003.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
clpX1; ATP-dependent Clp protease ATP-binding subunit ClpX
L3_108_000G1_scaffold_8_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(4118..5761)
DNA (1644bp) protein (548aa)
serine protease HtrA (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22536.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_8_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5906..6835)
DNA (930bp) protein (310aa)
Glycosyltransferase group 2 family protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCH5_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCY22537.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_108_000G1_scaffold_8_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(6842..8005)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22538.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
cell envelope-related transcriptional attenuator
L3_108_000G1_scaffold_8_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(8031..9449)
DNA (1419bp) protein (473aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3E1_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CCY22539.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Undecaprenyl-phosphate glucose phosphotransferase
L3_108_000G1_scaffold_8_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(9559..10515)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22540.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Predicted glycosyltransferases
L3_108_000G1_scaffold_8_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(10517..11941)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22541.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycosyl transferase 2
L3_108_000G1_scaffold_8_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(12072..13820)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22542.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
phosphomannomutase
L3_108_000G1_scaffold_8_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(13870..15852)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22543.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycosyl transferase 2
L3_108_000G1_scaffold_8_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(15878..17878)
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22544.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycosyl transferase family protein
L3_108_000G1_scaffold_8_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(17863..20028)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22545.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
SAM-dependent methyltransferase
L3_108_000G1_scaffold_8_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(20032..21333)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22546.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
polysaccharide ABC transporter ATP-binding protein
L3_108_000G1_scaffold_8_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(21843..22835)
DNA (993bp) protein (331aa)
Polysaccharide ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCI1_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
polysaccharide ABC transporter permease
L3_108_000G1_scaffold_8_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(22832..23392)
DNA (561bp) protein (187aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZB1_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CCY22548.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_8_17
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(23472..24404)
DNA (933bp) protein (311aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3E7_9FIRM
L3_108_000G1_scaffold_8_18
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(24486..25565)
DNA (1080bp) protein (360aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYX1_9FIRM
L3_108_000G1_scaffold_8_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(25938..28274)
DNA (2337bp) protein (779aa)
lyc25E; lysozyme Lyc25E (EC:3.2.1.17)
glycosyl hydrolase family 25 n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B58DD6
Uncharacterized protein {ECO:0000313|EMBL:CCY22551.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_8_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

28417..28716
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22552.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_8_21
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(28663..29007)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22553.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_8_22
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(29004..29366)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22554.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_8_23
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

29541..30590
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22555.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_8_24
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(30626..31396)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22557.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_8_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(31449..32606)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22558.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_8_26
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(32609..33700)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22559.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_8_27
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(33715..35256)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22560.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Predicted membrane protein involved in D-alanine export
L3_108_000G1_scaffold_8_28
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(35258..37039)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22561.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain
L3_108_000G1_scaffold_8_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37248..38684
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B7L9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68200.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_108_000G1_scaffold_8_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38606..40660)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83915.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
Displaying items 1-30 of 318 in total

View Taxonomy