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L3_108_000G1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 247 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_20_1
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3..449
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GF50_EUBLK
Phage terminase%2C large subunit%2C PBSX family {ECO:0000313|EMBL:CRH74393.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_108_000G1_scaffold_20_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

588..1820
DNA (1233bp) protein (411aa)
Phage portal protein, SPP1 family n=1 Tax=gut metagenome RepID=J9GSH6_9ZZZZ
Phage portal protein%2C SPP1 family {ECO:0000313|EMBL:CRH74394.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
portal protein
L3_108_000G1_scaffold_20_3
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1986..3500
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C1P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58787.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_108_000G1_scaffold_20_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3506..3664
DNA (159bp) protein (53aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH81347.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_108_000G1_scaffold_20_5
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

3714..4265
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LQ45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS60914.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
hypothetical protein
L3_108_000G1_scaffold_20_6
unknown

Not on your lists

4266..4586
DNA (321bp) protein (107aa)

This feature has no annotations

L3_108_000G1_scaffold_20_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4609..4905
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6M3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76414.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted ribosomal protein
L3_108_000G1_scaffold_20_8
unknown

Not on your lists

4970..5140
DNA (171bp) protein (57aa)

This feature has no annotations

L3_108_000G1_scaffold_20_9
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5211..5426
DNA (216bp) protein (72aa)
LysM domain/BON superfamily protein {ECO:0000313|EMBL:CRH83478.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_108_000G1_scaffold_20_10
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5523..5918)
DNA (396bp) protein (132aa)
Uncharacterized protein family UPF0150 n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SVZ7_SYNGF
hypothetical protein
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:ADY56781.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_108_000G1_scaffold_20_11
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5971..6153)
DNA (183bp) protein (61aa)
Toxin-antitoxin system, toxin component, HicA family n=1 Tax=Selenomonas artemidis F0399 RepID=E7N0X4_9FIRM
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFW30164.1}; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
hypothetical protein
L3_108_000G1_scaffold_20_12
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6454..7437)
DNA (984bp) protein (328aa)
alpha/beta hydrolase n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0002ED7673
Uncharacterized protein {ECO:0000313|EMBL:EJR10818.1}; TaxID=1053222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus MSX-D12.;"
alpha/beta hydrolase
L3_108_000G1_scaffold_20_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7630..9300
DNA (1671bp) protein (557aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Glutamate--tRNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8Y7_9FIRM
glutamyl-tRNA synthetase
L3_108_000G1_scaffold_20_14
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9302..10642
DNA (1341bp) protein (447aa)
Glutamine synthetase n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KD77_9FIRM
Glutamine synthetase {ECO:0000313|EMBL:CDB69074.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
glutamine synthetase
L3_108_000G1_scaffold_20_15
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10681..11322
DNA (642bp) protein (214aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DWH1_9FIRM
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:CCX83269.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L3_108_000G1_scaffold_20_16
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11332..12195
DNA (864bp) protein (288aa)
Bifunctional protein FolD n=2 Tax=Eubacterium RepID=C4Z3I2_EUBE2
methylenetetrahydrofolate dehydrogenase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_108_000G1_scaffold_20_17
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12236..13180
DNA (945bp) protein (315aa)
33 kDa chaperonin n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DX38_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
molecular chaperone Hsp33
L3_108_000G1_scaffold_20_18
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13170..13682
DNA (513bp) protein (171aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Shikimate kinase n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K437_9FIRM
shikimate kinase
L3_108_000G1_scaffold_20_19
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13695..15353
DNA (1659bp) protein (553aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Glutamine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DX92_9FIRM
glutaminyl-tRNA synthetase
L3_108_000G1_scaffold_20_20
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15437..15634
DNA (198bp) protein (66aa)
Cold shock protein (Beta-ribbon, CspA family) n=1 Tax=Dorea sp. 5-2 RepID=R9NE06_9FIRM
Cold shock protein (Beta-ribbon, CspA family) {ECO:0000313|EMBL:EOS81333.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
cold shock protein
L3_108_000G1_scaffold_20_21
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15858..18275
DNA (2418bp) protein (806aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K6V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB65756.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
hypothetical protein
L3_108_000G1_scaffold_20_22
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18300..19679
DNA (1380bp) protein (460aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=R7ACK5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56523.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L3_108_000G1_scaffold_20_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19660..20460
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36043.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_108_000G1_scaffold_20_24
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20489..21823
DNA (1335bp) protein (445aa)
putative manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BMA9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42882.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_000G1_scaffold_20_25
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21823..22695
DNA (873bp) protein (291aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E0U1_9FIRM
L3_108_000G1_scaffold_20_26
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22710..23636
DNA (927bp) protein (309aa)
N-glycosylase/DNA lyase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZM17_9FIRM
N-glycosylase/DNA lyase {ECO:0000313|EMBL:CDA39845.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
N-glycosylase/DNA lyase
L3_108_000G1_scaffold_20_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23791..24075
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HS27_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
chaperonin Cpn10
L3_108_000G1_scaffold_20_28
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24118..25737
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AR21_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
chaperonin GroEL
L3_108_000G1_scaffold_20_29
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

26121..26633
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
Ferritin-like protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y757_9BACT
ferritin
L3_108_000G1_scaffold_20_30
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26662..27033
DNA (372bp) protein (124aa)
Superoxide reductase n=1 Tax=Dialister invisus CAG:218 RepID=R5SS90_9FIRM
Superoxide reductase {ECO:0000313|EMBL:CCZ53709.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
desulfoferrodoxin ferrous iron-binding region
Displaying items 1-30 of 247 in total

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