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L3_108_000G1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_108_1
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2..2227)
DNA (2226bp) protein (742aa)
Bacterial group 3 Ig-like protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDB7_9FIRM
Bacterial group 3 Ig-like protein {ECO:0000313|EMBL:EDP10630.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
collagen-binding surface protein
L3_108_000G1_scaffold_108_2
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2499..3101)
DNA (603bp) protein (201aa)
Resolvase, N-terminal domain protein n=2 Tax=Firmicutes RepID=A8RDB6_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDE21866.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_000G1_scaffold_108_3
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3221..3439)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RDB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21864.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
conjugal transfer protein TraG
L3_108_000G1_scaffold_108_4
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3569..3781)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10627.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_000G1_scaffold_108_5
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4112..5725)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RDB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21862.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_000G1_scaffold_108_6
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5727..6761)
DNA (1035bp) protein (345aa)
Acyltransferase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDB2_9FIRM
Acyltransferase {ECO:0000313|EMBL:EDP10625.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L3_108_000G1_scaffold_108_7
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6797..7945)
DNA (1149bp) protein (383aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Alanine racemase n=2 Tax=Firmicutes RepID=A8RDB1_9FIRM
amino acid racemase
L3_108_000G1_scaffold_108_8
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7973..9037)
DNA (1065bp) protein (355aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Firmicutes RepID=A8RDB0_9FIRM
L3_108_000G1_scaffold_108_9
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9040..10416)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G789_9FIRM
L3_108_000G1_scaffold_108_10
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10615..11160)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10621.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_000G1_scaffold_108_11
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11260..12690)
DNA (1431bp) protein (477aa)
Xaa-His dipeptidase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G3X9_9FIRM
Xaa-His dipeptidase {ECO:0000313|EMBL:CDE21855.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
pepD; aminoacyl-histidine dipeptidase
L3_108_000G1_scaffold_108_12
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13047..13376
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=2 Tax=Firmicutes RepID=A8RDA5_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE21854.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
XRE family transcriptional regulator
L3_108_000G1_scaffold_108_13
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13562..14209)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10616.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L3_108_000G1_scaffold_108_14
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14733..15218
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G535_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21838.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_000G1_scaffold_108_15
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15768..17693)
DNA (1926bp) protein (642aa)
NADH oxidase {ECO:0000313|EMBL:EDP10615.1}; EC=1.-.-.- {ECO:0000313|EMBL:EDP10615.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
NADH oxidase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDA2_9FIRM
NADH:flavin oxidoreductase
L3_108_000G1_scaffold_108_16
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17705..19624)
DNA (1920bp) protein (640aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDA1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDP10614.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
NADH:flavin oxidoreductase
L3_108_000G1_scaffold_108_17
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19727..20920)
DNA (1194bp) protein (398aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDA0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDP10613.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
bacterial regulatory helix-turn-helix s, AraC family protein
L3_108_000G1_scaffold_108_18
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21030..21770)
DNA (741bp) protein (247aa)
Putative esterase n=2 Tax=Firmicutes RepID=A8RD99_9FIRM
Putative esterase {ECO:0000313|EMBL:CDE23842.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
esterase
L3_108_000G1_scaffold_108_19
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21864..23174)
DNA (1311bp) protein (437aa)
Polysaccharide deacetylase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GA21_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDE23841.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
polysaccharide deacetylase
L3_108_000G1_scaffold_108_20
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23286..25130
DNA (1845bp) protein (615aa)
GTP-binding protein TypA n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G9M8_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:CDE23840.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
GTP-binding protein TypA/BipA
L3_108_000G1_scaffold_108_21
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25265..25657)
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RD96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10609.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Zn-finger containing protein
L3_108_000G1_scaffold_108_22
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25996..26604
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RD94_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
membrane protein
L3_108_000G1_scaffold_108_23
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26862..27524)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RD93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10606.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_000G1_scaffold_108_24
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27676..28344)
DNA (669bp) protein (223aa)
TrkA N-terminal domain protein n=2 Tax=Firmicutes RepID=A8RD92_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDE23833.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
putative Ktr system potassium uptake protein A
L3_108_000G1_scaffold_108_25
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28356..29747)
DNA (1392bp) protein (464aa)
Potassium uptake protein, TrkH family n=2 Tax=Firmicutes RepID=A8RD91_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDP10604.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
putative Ktr system potassium uptake protein B
L3_108_000G1_scaffold_108_26
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29884..30420)
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Firmicutes RepID=A8RD90_9FIRM
Rubrerythrin {ECO:0000313|EMBL:CDE23831.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
rbr; rubrerythrin
L3_108_000G1_scaffold_108_27
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30732..32825
DNA (2094bp) protein (698aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDP10602.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDP10602.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Glutamate--ammonia ligase, catalytic domain protein n=2 Tax=Firmicutes RepID=A8RD89_9FIRM
glutamine synthetase
L3_108_000G1_scaffold_108_28
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33053..33514
DNA (462bp) protein (154aa)
Acetyltransferase, GNAT family n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RD88_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDP10601.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
acetyltransferase
L3_108_000G1_scaffold_108_29
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34399..35034)
DNA (636bp) protein (212aa)
V-type ATP synthase subunit D n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RD87_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
ntpD; cation exporting V-type ATP ATPase, subunit D
L3_108_000G1_scaffold_108_30
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35049..36479)
DNA (1431bp) protein (477aa)
V-type ATP synthase beta chain n=2 Tax=Firmicutes RepID=R7G700_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
ntpB; cation exporting V-type ATPase, subunit B
Displaying items 1-30 of 127 in total

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