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L3_108_000G1_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_160_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58..948)
DNA (891bp) protein (297aa)
membrane protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288CEF1
eamA-like transporter family protein
EamA-like transporter family protein {ECO:0000313|EMBL:AIY85144.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1155..2321)
DNA (1167bp) protein (389aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1L8_9CLOT
iron-containing alcohol dehydrogenase family protein
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:AIY84622.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2368..3762)
DNA (1395bp) protein (465aa)
gltA; glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13)
Glutamate synthase, homotetrameric n=2 Tax=Clostridium butyricum RepID=B1QWU1_CLOBU
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:KJU71151.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_160_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3762..4652)
DNA (891bp) protein (297aa)
Ferredoxin-NADP+ reductase n=1 Tax=Clostridium colicanis 209318 RepID=N9XYI5_9CLOT
NAD-binding oxidoreductase {ECO:0000313|EMBL:KJU71152.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
oxidoreductase NAD-binding domain protein
L3_108_000G1_scaffold_160_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4868..6790)
DNA (1923bp) protein (641aa)
Putative Signal-transduction and transcriptional-control protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71153.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sensory box protein
L3_108_000G1_scaffold_160_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6968..7438)
DNA (471bp) protein (157aa)
SsrA-binding protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y323_9CLOT
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7569..9800)
DNA (2232bp) protein (744aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:AIY84330.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ribonuclease R n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H202_9CLOT
rnr; ribonuclease R
L3_108_000G1_scaffold_160_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10073..12088)
DNA (2016bp) protein (672aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium colicanis 209318 RepID=N9Y414_9CLOT
L3_108_000G1_scaffold_160_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12299..12529)
DNA (231bp) protein (77aa)
Preprotein translocase, SecG subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKN2_9CLOT
secG; preprotein translocase, SecG subunit
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:AIY83699.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12652..13947)
DNA (1296bp) protein (432aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:AIY82497.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Enolase n=8 Tax=Clostridium perfringens RepID=ENO_CLOP1
L3_108_000G1_scaffold_160_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14287..14886)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y329_9CLOT
putative protein kinase
Uncharacterized protein {ECO:0000313|EMBL:AIY84366.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15125..15541)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM62_ALKOO
Membrane protein {ECO:0000313|EMBL:KJU71160.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_108_000G1_scaffold_160_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15760..16644)
DNA (885bp) protein (295aa)
ROK family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W3N8_9FIRM
ROK family protein
ROK family protein {ECO:0000313|EMBL:AIY84478.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16663..18039)
DNA (1377bp) protein (459aa)
gmuD; 6-phospho-beta-glucosidase gmuD (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IE37_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU71162.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_160_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18052..18849)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H214_9CLOT
SIS domain protein
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:KJU71163.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_160_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18879..21497)
DNA (2619bp) protein (873aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2W9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82889.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21557..23548)
DNA (1992bp) protein (664aa)
fruA; PTS system, fructose subfamily, IIA component domain protein (EC:2.7.1.69)
PTS system, fructose subfamily, IIA component domain protein {ECO:0000313|EMBL:AIY82313.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AIY82313.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
PTS system, Fru family, IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCX6_9CLOT
L3_108_000G1_scaffold_160_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23789..25321)
DNA (1533bp) protein (511aa)
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium colicanis 209318 RepID=N9WHM8_9CLOT
L3_108_000G1_scaffold_160_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25515..26261)
DNA (747bp) protein (249aa)
tpiA; triose-phosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Triosephosphate isomerase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y422_9CLOT
L3_108_000G1_scaffold_160_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26374..27564)
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Phosphoglycerate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSA5_9CLOT
phosphoglycerate kinase family protein
L3_108_000G1_scaffold_160_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27676..28677)
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y333_9CLOT
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
L3_108_000G1_scaffold_160_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28728..29798)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WI47_9CLOT
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KJU71170.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cggR; central glycolytic regulator
L3_108_000G1_scaffold_160_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29936..31318)
DNA (1383bp) protein (461aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium colicanis 209318 RepID=N9WHN2_9CLOT
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:AIY84149.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31372..32439)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y427_9CLOT
basic membrane family protein
Basic membrane family protein {ECO:0000313|EMBL:AIY84738.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32554..33396)
DNA (843bp) protein (281aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XSB3_9CLOT
EDD, DegV family domain protein
EDD, DegV family domain protein {ECO:0000313|EMBL:AIY82932.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33416..33931)
DNA (516bp) protein (172aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y340_9CLOT
spoU rRNA Methylase family protein
L3_108_000G1_scaffold_160_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34063..35079)
DNA (1017bp) protein (339aa)
splB; spore photoproduct lyase (EC:4.1.99.14)
Spore photoproduct lyase {ECO:0000313|EMBL:AIY84327.1}; EC=4.1.99.14 {ECO:0000313|EMBL:AIY84327.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Putative Spore photoproduct lyase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMW1_9CLOT
L3_108_000G1_scaffold_160_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35128..35967)
DNA (840bp) protein (280aa)
phosphoglycolate phosphatase,-type (EC:3.1.3.18)
Phosphoglycolate phosphatase,-type {ECO:0000313|EMBL:AIY82909.1}; EC=3.1.3.18 {ECO:0000313|EMBL:AIY82909.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Cof-like hydrolase n=1 Tax=Clostridium colicanis 209318 RepID=N9WI54_9CLOT
L3_108_000G1_scaffold_160_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36130..37542)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WHN8_9CLOT
putative peptidoglycan binding domain protein
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:AIY83741.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_160_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37720..38676)
DNA (957bp) protein (319aa)
Glycosyl hydrolase, family 25 n=2 Tax=Clostridium botulinum B RepID=B2TPY1_CLOBB
glycosyl hydrolases 25 family protein
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:AIY83367.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 111 in total

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