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L3_108_000G1_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_210_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(486..962)
DNA (477bp) protein (159aa)
CvpA family protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0Y8_9FIRM
CvpA family protein {ECO:0000313|EMBL:CCY21734.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_210_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(973..2169)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21735.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(2335..3693)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HAE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21736.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3787..4788)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71595.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_108_000G1_scaffold_210_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(4840..5871)
DNA (1032bp) protein (344aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Aldose 1-epimerase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0Z3_9FIRM
aldose 1-epimerase
L3_108_000G1_scaffold_210_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5964..6560)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWH4_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(6560..6913)
DNA (354bp) protein (118aa)
Nucleoid-associated protein BN555_01447 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HAE9_9FIRM
Nucleoid-associated protein BN555_01447 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(6932..8512)
DNA (1581bp) protein (527aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21742.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_210_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(8541..9614)
DNA (1074bp) protein (358aa)
pfkA1; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWY2_9FIRM
6-phosphofructokinase 1 {ECO:0000313|EMBL:CCY21743.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_210_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(9762..11870)
DNA (2109bp) protein (703aa)
Beta-glucosidase-related glycosidases n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GXU7_9FIRM
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CCY22215.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Beta-glucosidase-related glycosidases
L3_108_000G1_scaffold_210_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(12031..13515)
DNA (1485bp) protein (495aa)
L-fucose isomerase and related proteins n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H2B3_9FIRM
L-fucose isomerase and related proteins {ECO:0000313|EMBL:CCY22214.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L-fucose isomerase and related proteins
L3_108_000G1_scaffold_210_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(13629..14243)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GY98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22213.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(14329..15927)
DNA (1599bp) protein (533aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HBD9_9FIRM
Xylulokinase {ECO:0000313|EMBL:CCY22212.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_210_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16227..17243
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2C9F1_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERI65887.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Transcriptional regulators
L3_108_000G1_scaffold_210_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(17367..19205)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GY92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22208.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_16
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19572..20948
DNA (1377bp) protein (459aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EDR1_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDE00423.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_108_000G1_scaffold_210_17
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21018..22349)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87031.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_108_000G1_scaffold_210_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22447..23583)
DNA (1137bp) protein (379aa)
Uracil-xanthine permease n=2 Tax=Coprobacillus RepID=H1AGL6_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:CCZ31776.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
xanthine permease
L3_108_000G1_scaffold_210_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists


comp(23736..24329)
DNA (594bp) protein (198aa)
50S ribosomal protein L25 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H5F1_9FIRM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
LSU ribosomal protein L25P
L3_108_000G1_scaffold_210_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists


comp(24534..25964)
DNA (1431bp) protein (477aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HD94_9FIRM
L3_108_000G1_scaffold_210_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26474..27616
DNA (1143bp) protein (381aa)
Citrate transporter n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ56_9FIRM
Citrate transporter {ECO:0000313|EMBL:EDM98705.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
transporter, YbiR family
L3_108_000G1_scaffold_210_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28026..29354
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38710.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
signal transduction protein with a C-terminal ATPase domain
L3_108_000G1_scaffold_210_23
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

29351..30091
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21359.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
LytTR family two component transcriptional regulator
L3_108_000G1_scaffold_210_24
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(30063..31118)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21360.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Predicted permease
L3_108_000G1_scaffold_210_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(31165..32766)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21361.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
O-Antigen ligase.
L3_108_000G1_scaffold_210_26
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(32738..33475)
DNA (738bp) protein (246aa)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H8V1_9FIRM
RNA pseudouridine synthase {ECO:0000313|EMBL:CCY21362.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_210_27
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(33615..34304)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21363.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_000G1_scaffold_210_28
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(34282..35781)
DNA (1500bp) protein (500aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
two component system histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZX3_9FIRM
L3_108_000G1_scaffold_210_29
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

36042..36440
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21365.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Fe2+/Zn2+ uptake regulation proteins
L3_108_000G1_scaffold_210_30
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

36511..37053
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21366.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Rubrerythrin
Displaying items 1-30 of 103 in total

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