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L3_108_000G1_scaffold_249

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_249_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(415..2508)
DNA (2094bp) protein (698aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYL0_9FIRM
L3_108_000G1_scaffold_249_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(2510..3961)
DNA (1452bp) protein (484aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCK5_9FIRM
L3_108_000G1_scaffold_249_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(4118..5605)
DNA (1488bp) protein (496aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HC68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22457.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_249_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5685..7460)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22458.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
sugar ABC transporter substrate-binding protein
L3_108_000G1_scaffold_249_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(7527..8399)
DNA (873bp) protein (291aa)
Sugar ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYL5_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCY22460.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
maltose/maltodextrin transport system permease
L3_108_000G1_scaffold_249_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(8396..9805)
DNA (1410bp) protein (470aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Sugar ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HCL1_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCY22461.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_249_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(9866..11206)
DNA (1341bp) protein (447aa)
Putative sugar-binding secreted protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HC75_9FIRM
Putative sugar-binding secreted protein {ECO:0000313|EMBL:CCY22462.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_108_000G1_scaffold_249_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(11305..13071)
DNA (1767bp) protein (589aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GYZ8_9FIRM
two-component system sensor histidine kinase YesM
L3_108_000G1_scaffold_249_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(13031..14587)
DNA (1557bp) protein (519aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H343_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY22464.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
two component transcriptional regulator, AraC family
L3_108_000G1_scaffold_249_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14618..15613)
DNA (996bp) protein (332aa)
DNA-entry nuclease n=1 Tax=Dorea sp. 5-2 RepID=R9N5E5_9FIRM
DNA-entry nuclease {ECO:0000313|EMBL:EOS78268.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_108_000G1_scaffold_249_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15662..16069)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 PF8_9FIRM">RepID=D7GPF8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42693.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_108_000G1_scaffold_249_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16589..17296)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57006.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_108_000G1_scaffold_249_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17289..18515)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57007.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_108_000G1_scaffold_249_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18639..20291)
DNA (1653bp) protein (551aa)
Uridine kinase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K308_9FIRM
Uridine kinase {ECO:0000313|EMBL:EGN37876.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
phosphoribulokinase/uridine kinase
L3_108_000G1_scaffold_249_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20316..21209)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AJ87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65919.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Predicted SAM-dependent methyltransferase
L3_108_000G1_scaffold_249_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(21304..22419)
DNA (1116bp) protein (372aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZT5_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
RpoD family RNA polymerase sigma factor
L3_108_000G1_scaffold_249_17
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(22459..24243)
DNA (1785bp) protein (595aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDU1_9FIRM
L3_108_000G1_scaffold_249_18
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(24414..25310)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HDG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22912.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Esterase/lipase
L3_108_000G1_scaffold_249_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25533..25742)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIZ0_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77664.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_108_000G1_scaffold_249_20
unknown

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comp(25767..25874)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_108_000G1_scaffold_249_21
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25973..26425)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZSJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15309.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L3_108_000G1_scaffold_249_22
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26512..26904)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3AEM9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDE33728.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
hypothetical protein
L3_108_000G1_scaffold_249_23
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26968..27435)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J2P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28449.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_108_000G1_scaffold_249_24
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

27727..29016
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22913.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Alcohol acetyltransferase.
L3_108_000G1_scaffold_249_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

29049..29756
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22914.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_108_000G1_scaffold_249_26
unknown

Not on your lists

comp(29721..29888)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_108_000G1_scaffold_249_27
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(29848..30498)
DNA (651bp) protein (217aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Fructose-2 6-bisphosphatase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H820_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CCY21032.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_249_28
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30495..31139)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JAQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31280.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L3_108_000G1_scaffold_249_29
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(31459..32157)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
MTA/SAH nucleosidase (EC:3.2.2.9)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GV50_9FIRM
L3_108_000G1_scaffold_249_30
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(32193..32768)
DNA (576bp) protein (192aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
luxS; S-ribosylhomocysteinase LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZ39_9FIRM
Displaying items 1-30 of 98 in total

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