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L3_108_000G1_scaffold_254

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_254_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..701
DNA (699bp) protein (233aa)
Putative membrane protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYM3_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EEG55817.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_108_000G1_scaffold_254_2
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(698..1258)
DNA (561bp) protein (187aa)
NADPH-dependent FMN reductase n=3 Tax=Bacteria RepID=C8WGK7_EGGLE
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ACV55248.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_108_000G1_scaffold_254_3
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1435..1863
DNA (429bp) protein (143aa)
Viscotoxin-A3 n=2 Tax=Eggerthella RepID=E5X629_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72372.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L3_108_000G1_scaffold_254_4
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1869..2429
DNA (561bp) protein (187aa)
Hydrogenase maturation protease n=4 Tax=Bacteria RepID=C8WGK8_EGGLE
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:EGC89666.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_108_000G1_scaffold_254_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2654..3649
DNA (996bp) protein (332aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2P0_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI70675.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
diguanylate cyclase
L3_108_000G1_scaffold_254_6
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3673..4587)
DNA (915bp) protein (305aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA08_9ACTN
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL04555.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_7
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5668..6090
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA09_9ACTN
Protein of unknown function, DUF488.
Uncharacterized protein {ECO:0000313|EMBL:CBL04556.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_8
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6263..6904
DNA (642bp) protein (214aa)
Transcriptional regulator n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA10_9ACTN
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL04557.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_9
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6901..7455
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Eggerthella RepID=C8WGL2_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC89581.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_108_000G1_scaffold_254_10
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7527..8147)
DNA (621bp) protein (207aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HLX7_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGC89707.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
XRE family transcriptional regulator
L3_108_000G1_scaffold_254_11
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8246..8920)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA11_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04558.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_12
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8917..9846)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034DA923
Uncharacterized protein {ECO:0000313|EMBL:CDD58051.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
hypothetical protein
L3_108_000G1_scaffold_254_13
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9846..10580)
DNA (735bp) protein (245aa)
Amino acid ABC transporter ATP-binding component n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CG73_9ACTN
amino acid ABC transporter ATP-binding component
Amino acid ABC transporter ATP-binding component {ECO:0000313|EMBL:BAN78152.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L3_108_000G1_scaffold_254_14
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10570..11295)
DNA (726bp) protein (242aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9L3B1_9ACTN
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EOS50237.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
amino acid ABC transporter permease component
L3_108_000G1_scaffold_254_15
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11402..12277)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KVI9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS50236.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
amino acid ABC transporter substrate binding component
L3_108_000G1_scaffold_254_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12274..12717)
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=2 Tax=Bacteria RepID=F0HLY1_9ACTN
Iron dependent repressor, N-terminal DNA binding domain protein {ECO:0000313|EMBL:EQI02752.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
transcriptional regulator
L3_108_000G1_scaffold_254_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12997..13794
DNA (798bp) protein (266aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q938_9CLOT
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EKY24468.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
carboxymuconolactone decarboxylase
L3_108_000G1_scaffold_254_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13818..14960)
DNA (1143bp) protein (381aa)
Aldo/keto reductase family protein n=1 Tax=Clostridium difficile F501 RepID=T4B1G1_CLODI
Aldo/keto reductase family protein {ECO:0000313|EMBL:EQI02746.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
aldo/keto reductase
L3_108_000G1_scaffold_254_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15030..17054)
DNA (2025bp) protein (675aa)
Excinuclease ABC subunit A n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XE55_9CLOT
Excinuclease ABC subunit A {ECO:0000313|EMBL:KJF41309.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter
L3_108_000G1_scaffold_254_20
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17532..18194)
DNA (663bp) protein (221aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Endonuclease III n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA12_9ACTN
L3_108_000G1_scaffold_254_21
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18866..22411
DNA (3546bp) protein (1182aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Transcription-repair-coupling factor n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGM0_EGGLE
transcription-repair coupling factor
L3_108_000G1_scaffold_254_22
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22408..23502
DNA (1095bp) protein (365aa)
Putative membrane protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HLY8_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EGC89640.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_108_000G1_scaffold_254_23
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23499..24494
DNA (996bp) protein (332aa)
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA13_9ACTN
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:CBL04560.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_24
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24491..25000
DNA (510bp) protein (170aa)
Aminoglycoside-2''-adenylyltransferase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA14_9ACTN
Aminoglycoside-2''-adenylyltransferase.
Aminoglycoside-2''-adenylyltransferase {ECO:0000313|EMBL:CBL04561.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_25
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25016..25588)
DNA (573bp) protein (191aa)
Predicted integral membrane protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA15_9ACTN
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL04562.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_26
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25545..25853)
DNA (309bp) protein (103aa)
Transcriptional regulator, ArsR family n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA16_9ACTN
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CBL04563.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_27
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26164..26703
DNA (540bp) protein (180aa)
Amidase nicotinamidase family protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6S5_9FIRM
Amidase nicotinamidase family protein {ECO:0000313|EMBL:EFW06231.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
nicotinamidase-like amidase
L3_108_000G1_scaffold_254_28
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26717..27817
DNA (1101bp) protein (367aa)
Renal dipeptidase family protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HLZ1_9ACTN
Renal dipeptidase family protein {ECO:0000313|EMBL:EGC89737.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
peptidase M19
L3_108_000G1_scaffold_254_29
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28007..28462
DNA (456bp) protein (152aa)
Transcriptional regulators n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EA17_9ACTN
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL04564.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_000G1_scaffold_254_30
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28468..29799
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WGM6_EGGLE
MATE efflux family protein
Uncharacterized protein {ECO:0000313|EMBL:KGI72423.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Displaying items 1-30 of 88 in total

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