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L3_108_000G1_scaffold_273

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_273_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(116..2593)
DNA (2478bp) protein (826aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ARJ3_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHQ44647.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
diguanylate kinase signaling protein
L3_108_000G1_scaffold_273_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2688..3122)
DNA (435bp) protein (145aa)
UPF0178 protein HMPREF1021_03098 n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R5F6_9FIRM
UPF0178 protein HMPREF1021_03098 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_108_000G1_scaffold_273_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3110..3691)
DNA (582bp) protein (194aa)
Peptidase, S54 family n=5 Tax=Erysipelotrichaceae RepID=B0N4M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34979.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_108_000G1_scaffold_273_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3692..4510)
DNA (819bp) protein (273aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34980.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_108_000G1_scaffold_273_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4670..6901)
DNA (2232bp) protein (744aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4M1_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CCZ34981.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative signaling protein
L3_108_000G1_scaffold_273_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7013..12253)
DNA (5241bp) protein (1747aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RMD7_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDS18622.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycosyl hydrolase
L3_108_000G1_scaffold_273_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12543..15650)
DNA (3108bp) protein (1036aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R5F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89907.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glycosyl hydrolase
L3_108_000G1_scaffold_273_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15647..18382)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R5F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89907.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_108_000G1_scaffold_273_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18652..19497)
DNA (846bp) protein (282aa)
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N4L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34994.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Transcriptional regulator
L3_108_000G1_scaffold_273_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19646..21115)
DNA (1470bp) protein (490aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Glutamate--tRNA ligase n=2 Tax=Coprobacillus RepID=G9R5E9_9FIRM
glutamyl-tRNA synthase
L3_108_000G1_scaffold_273_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21082..21564)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N4L6_9FIRM
L3_108_000G1_scaffold_273_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21637..22392)
DNA (756bp) protein (252aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18617.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_108_000G1_scaffold_273_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22410..23150)
DNA (741bp) protein (247aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34999.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_273_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23155..23967)
DNA (813bp) protein (271aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18615.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_108_000G1_scaffold_273_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24082..25569)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R5E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89900.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_108_000G1_scaffold_273_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25722..27326)
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase n=5 Tax=Erysipelotrichaceae RepID=B0N4L1_9FIRM
L3_108_000G1_scaffold_273_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27726..28985)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RMC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35003.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_108_000G1_scaffold_273_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29083..31731)
DNA (2649bp) protein (883aa)
Alcohol dehydrogenase, iron-dependent n=5 Tax=Erysipelotrichaceae RepID=B0N4K9_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
L3_108_000G1_scaffold_273_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31921..32610)
DNA (690bp) protein (230aa)
Glycerophosphodiester phosphodiesterase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N4K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35013.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycerophosphoryl diester phosphodiesterase
L3_108_000G1_scaffold_273_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32620..33609)
DNA (990bp) protein (330aa)
K+-dependent Na+/Ca+ exchanger family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4K7_9FIRM
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDS18609.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
K+-dependent Na+/Ca+ exchanger related-protein
L3_108_000G1_scaffold_273_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33717..34538)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=5 Tax=Erysipelotrichaceae RepID=B0N4K6_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS18608.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
cof family hydrolase
L3_108_000G1_scaffold_273_22
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34574..35047)
DNA (474bp) protein (158aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RMC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44668.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Cu/Zn superoxide dismutase
L3_108_000G1_scaffold_273_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35111..36541)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=R5RJU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35021.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
nlpC/P60 family protein
L3_108_000G1_scaffold_273_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(36851..41434)
DNA (4584bp) protein (1528aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R5D5_9FIRM
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EHM89891.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_108_000G1_scaffold_273_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(41681..42238)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=4 Tax=Erysipelotrichaceae RepID=B0N4K2_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcription antitermination protein NusG
L3_108_000G1_scaffold_273_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(42240..42428)
DNA (189bp) protein (63aa)
Preprotein translocase, SecE subunit n=5 Tax=Erysipelotrichaceae RepID=B0N4K1_9FIRM
Preprotein translocase SecE subunit {ECO:0000313|EMBL:CCZ35033.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_273_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(42638..43243)
DNA (606bp) protein (202aa)
RNA polymerase sigma factor, sigma-70 family n=5 Tax=Erysipelotrichaceae RepID=B0N4K0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ35034.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_273_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(43260..43985)
DNA (726bp) protein (242aa)
RNA methyltransferase, TrmH family, group 3 n=4 Tax=Coprobacillus RepID=C3RMB5_9FIRM
23S rRNA methyltransferase {ECO:0000313|EMBL:CCZ35035.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
TrmH family RNA methyltransferase
L3_108_000G1_scaffold_273_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(44023..44400)
DNA (378bp) protein (126aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Mini-ribonuclease 3 n=5 Tax=Erysipelotrichaceae RepID=B0N4J8_9FIRM
hypothetical protein
L3_108_000G1_scaffold_273_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(44400..45737)
DNA (1338bp) protein (446aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Cysteine--tRNA ligase n=5 Tax=Erysipelotrichaceae RepID=B0N4J7_9FIRM
cysteinyl-tRNA synthetase
Displaying items 1-30 of 82 in total

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