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L3_108_000G1_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_279_1
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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104..1018
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZY1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG74709.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ABC-type multidrug transport system, ATPase and permease components
L3_108_000G1_scaffold_279_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1022..2758
DNA (1737bp) protein (579aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYC0_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL22623.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_108_000G1_scaffold_279_3
unknown

Not on your lists

2794..2982
DNA (189bp) protein (63aa)

This feature has no annotations

L3_108_000G1_scaffold_279_4
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2987..3619
DNA (633bp) protein (211aa)
Putative methyltransferase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GP23_EUBLK
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:ADO37627.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_108_000G1_scaffold_279_5
unknown

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comp(3692..4321)
DNA (630bp) protein (210aa)

This feature has no annotations

L3_108_000G1_scaffold_279_6
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4566..5633
DNA (1068bp) protein (356aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FMX1_9FIRM
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EGW40942.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_108_000G1_scaffold_279_7
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5603..6529
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V653_9DELT
putative oligopeptide ABC transporter permease protein
Tax=BJP_IG2069_Clostridiales_42_11
L3_108_000G1_scaffold_279_8
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6552..8180
DNA (1629bp) protein (543aa)
Putative oligopeptide ABC transporter oligopeptide-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX27_OSCVS
putative oligopeptide ABC transporter oligopeptide-binding protein
Putative oligopeptide ABC transporter oligopeptide-binding protein {ECO:0000313|EMBL:BAK98442.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_108_000G1_scaffold_279_9
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8205..9239
DNA (1035bp) protein (345aa)
Oligopeptide ABC transport system ATP-binding protein OppD1 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEC2_ACEWD
oppD1; oligopeptide ABC transport system ATP-binding protein OppD1
Oligopeptide ABC transport system ATP-binding protein OppD1 {ECO:0000313|EMBL:AFA46836.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_108_000G1_scaffold_279_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9243..10127
DNA (885bp) protein (295aa)
Oligopeptide ABC transport system ATP-binding protein OppF1 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LEC3_ACEWD
oppF1; oligopeptide ABC transport system ATP-binding protein OppF1
Oligopeptide ABC transport system ATP-binding protein OppF1 {ECO:0000313|EMBL:AFA46837.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_108_000G1_scaffold_279_11
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10399..11286)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JTW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY57978.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
GDSL family lipase
L3_108_000G1_scaffold_279_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11488..12312)
DNA (825bp) protein (275aa)
ABC transporter n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481C01
Uncharacterized protein {ECO:0000313|EMBL:ETI94526.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC-3 protein
L3_108_000G1_scaffold_279_13
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12329..13027)
DNA (699bp) protein (233aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63891.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_108_000G1_scaffold_279_14
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13033..14022)
DNA (990bp) protein (330aa)
Periplasmic solute binding family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W4E4_9FIRM
Periplasmic solute binding family protein {ECO:0000313|EMBL:EFF64202.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_108_000G1_scaffold_279_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14036..14452)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63893.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Fe2+/Zn2+ uptake regulation proteins
L3_108_000G1_scaffold_279_16
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14896..15579)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG29579.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_108_000G1_scaffold_279_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15576..15947)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG29576.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_108_000G1_scaffold_279_18
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16078..16608
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1T3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74097.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_108_000G1_scaffold_279_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16715..17890)
DNA (1176bp) protein (392aa)
cell division protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036D7516
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EJF39969.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
rodA_1; rod shape-determining protein RodA
L3_108_000G1_scaffold_279_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18074..19741
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RVJ9_9CLOT
L3_108_000G1_scaffold_279_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19769..20194
DNA (426bp) protein (142aa)
YjeE family ATPase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036F8898
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:EJF40102.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
conserved hypothetical nucleotide-binding protein
L3_108_000G1_scaffold_279_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20191..20904
DNA (714bp) protein (238aa)
tRNA threonylcarbamoyl adenosine modification protein YeaZ n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6R1_9CLOT
tRNA threonylcarbamoyl adenosine modification protein YeaZ {ECO:0000313|EMBL:EJF40127.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_108_000G1_scaffold_279_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20901..21344
DNA (444bp) protein (148aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EJF40001.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EJF40001.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ribose 5-phosphate isomerase B (EC:5.3.1.6)
ribose 5-phosphate isomerase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000378F86C
L3_108_000G1_scaffold_279_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21383..22312)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037EE412
PF14315 domain protein {ECO:0000313|EMBL:EJF38639.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_108_000G1_scaffold_279_25
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22319..23539)
DNA (1221bp) protein (407aa)
UPF0348 protein HMPREF1141_2449 n=1 Tax=Clostridium sp. MSTE9 RepID=J1H0C9_9CLOT
UPF0348 protein HMPREF1141_2449 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_108_000G1_scaffold_279_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23646..24869
DNA (1224bp) protein (408aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=Clostridium RepID=A7VXK3_9CLOT
L3_108_000G1_scaffold_279_27
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24912..25178)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DYF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89346.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L3_108_000G1_scaffold_279_28
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(25348..26211)
DNA (864bp) protein (288aa)
Ubiquitin, putative n=2 Tax=Trichomonas vaginalis RepID=A2DGL5_TRIVA
Ubiquitin, putative {ECO:0000313|EMBL:EAY20402.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
L3_108_000G1_scaffold_279_29
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26231..27115)
DNA (885bp) protein (295aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHH7_9CLOT
L3_108_000G1_scaffold_279_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(27129..28259)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y7M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27299.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
Displaying items 1-30 of 90 in total

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