ggKbase home page

L3_108_000G1_scaffold_295

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_295_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

176..1699
DNA (1524bp) protein (508aa)
Amino acid/peptide transporter n=2 Tax=root RepID=R7JJZ6_9BACT
Amino acid/peptide transporter {ECO:0000313|EMBL:CDE63222.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
amino acid/peptide transporter
L3_108_000G1_scaffold_295_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2493..3707)
DNA (1215bp) protein (405aa)
Transcriptional regulator, AraC family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTS9_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS04295.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_108_000G1_scaffold_295_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4516..5304
DNA (789bp) protein (263aa)
Metallo-beta-lactamase domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JH79_9BACT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDE63220.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_108_000G1_scaffold_295_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5309..6124
DNA (816bp) protein (272aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTT2_9BACT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDS04298.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
short-chain alcohol dehydrogenase
L3_108_000G1_scaffold_295_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6502..7443)
DNA (942bp) protein (314aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EDS04300.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EDS04300.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Ribose-phosphate diphosphokinase n=3 Tax=root RepID=B0MU68_9BACT
ribose-phosphate pyrophosphokinase
L3_108_000G1_scaffold_295_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7521..8117)
DNA (597bp) protein (199aa)
Probable GTP-binding protein EngB n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU69_9BACT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L3_108_000G1_scaffold_295_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8826..9224
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MU56_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63216.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_108_000G1_scaffold_295_8
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9360..10472
DNA (1113bp) protein (371aa)
Tetratricopeptide repeat protein n=2 Tax=root RepID=B0MU57_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS04304.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_108_000G1_scaffold_295_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10633..11358
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MU58_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63213.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_108_000G1_scaffold_295_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11351..11962
DNA (612bp) protein (204aa)
Transcriptional regulator, LuxR family n=2 Tax=Alistipes RepID=B0MU59_9BACT
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDE63212.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
transcriptional regulator, LuxR family
L3_108_000G1_scaffold_295_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12557..12688
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JH11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63209.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_108_000G1_scaffold_295_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12997..13401
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04309.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_108_000G1_scaffold_295_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13385..13717)
DNA (333bp) protein (111aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Diaminopimelate decarboxylase (EC:4.1.1.19)
Pyridoxal-dependent decarboxylase C-terminal sheet domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJY0_9BACT
L3_108_000G1_scaffold_295_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13763..14419)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04310.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_108_000G1_scaffold_295_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14497..15891)
DNA (1395bp) protein (465aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Pyridoxal-dependent decarboxylase C-terminal sheet domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJY0_9BACT
diaminopimelate decarboxylase
L3_108_000G1_scaffold_295_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16165..16926
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JHJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63206.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_108_000G1_scaffold_295_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16968..18179
DNA (1212bp) protein (404aa)
Sigma-54 interaction domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU66_9BACT
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDS04313.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transcriptional regulator
L3_108_000G1_scaffold_295_18
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18200..18718
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MU70_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63204.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_108_000G1_scaffold_295_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18746..19204
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=root RepID=B0MU71_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04315.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_108_000G1_scaffold_295_20

Not on your lists

19221..19595
DNA (375bp) protein (125aa)
Preprotein translocase, SecG subunit n=4 Tax=root RepID=B0MU72_9BACT
Preprotein translocase SecG subunit {ECO:0000313|EMBL:EKC77111.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
protein translocase subunit SecG
L3_108_000G1_scaffold_295_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19980..20555)
DNA (576bp) protein (192aa)
Acetyltransferase, GNAT family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU73_9BACT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS04317.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
acetyltransferase, ribosomal protein N-acetylase
L3_108_000G1_scaffold_295_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20578..21438)
DNA (861bp) protein (287aa)
TIGR00159 family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU80_9BACT
TIGR00159 family protein {ECO:0000313|EMBL:EDS04319.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_108_000G1_scaffold_295_23

Not on your lists

21894..22172
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=root RepID=K1S4K9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC52458.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_000G1_scaffold_295_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22705..23565
DNA (861bp) protein (287aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein n=4 Tax=root RepID=B0MU84_9BACT
Linear amide C-N hydrolase choloylglycine hydrolase family protein {ECO:0000313|EMBL:CDE63934.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
penicillin V acylase-like amidase
L3_108_000G1_scaffold_295_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23572..24141)
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=root RepID=B0MU85_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04323.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transcriptional regulator
L3_108_000G1_scaffold_295_26
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24125..25402)
DNA (1278bp) protein (426aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU86_9BACT
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EDS04324.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
phosphoadenosine phosphosulfate sulfotransferase
L3_108_000G1_scaffold_295_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25405..25806)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU87_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04325.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_108_000G1_scaffold_295_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26454..27212)
DNA (759bp) protein (253aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU89_9BACT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS04327.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_108_000G1_scaffold_295_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27209..28213)
DNA (1005bp) protein (335aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU90_9BACT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDS04328.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ABC-type Fe3+-siderophore transport system, permease component
L3_108_000G1_scaffold_295_30
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28218..29354)
DNA (1137bp) protein (379aa)
Periplasmic binding protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU74_9BACT
Periplasmic binding protein {ECO:0000313|EMBL:EDS04329.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
periplasmic binding protein
Displaying items 1-30 of 172 in total

View Taxonomy