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L3_108_000G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_358_1

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comp(175..483)
DNA (309bp) protein (103aa)
Toxin-antitoxin system, toxin component, RelE family (Fragment) n=1 Tax=human gut metagenome RepID=K1S6C2_9ZZZZ
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EKC52983.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_108_000G1_scaffold_358_2
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(473..739)
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M0K6_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EOS61407.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_108_000G1_scaffold_358_3
unknown

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917..1069
DNA (153bp) protein (51aa)

This feature has no annotations

L3_108_000G1_scaffold_358_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

1661..2803
DNA (1143bp) protein (381aa)
putative RNA helicase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14388.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_108_000G1_scaffold_358_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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2829..3779
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26239.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_358_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

3839..4717
DNA (879bp) protein (293aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H960_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY26240.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_358_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5037..5828
DNA (792bp) protein (264aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQ71_9FIRM
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 {ECO:0000313|EMBL:CBL22929.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_108_000G1_scaffold_358_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5942..6913
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QKZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66254.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_108_000G1_scaffold_358_9

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6941..7555
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1UFB2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78679.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_108_000G1_scaffold_358_10

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7552..8550
DNA (999bp) protein (333aa)
Protein containing DUF1814 n=1 Tax=human gut metagenome RepID=K1U922_9ZZZZ
Protein containing DUF1814 {ECO:0000313|EMBL:EKC78678.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Domain of unknown function (DUF1814).
L3_108_000G1_scaffold_358_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(8682..11276)
DNA (2595bp) protein (865aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HHZ8_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ATP-dependent chaperone ClpB
L3_108_000G1_scaffold_358_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(11343..11771)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27746.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hsp20; Heat shock protein Hsp20
L3_108_000G1_scaffold_358_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

12084..13274
DNA (1191bp) protein (397aa)
aspartate aminotransferase (EC:2.6.1.1)
PLP-dependent aminotransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDZ8_9FIRM
PLP-dependent aminotransferase {ECO:0000313|EMBL:CCY27748.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_358_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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13422..14117
DNA (696bp) protein (232aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF63_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY28380.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_000G1_scaffold_358_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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14114..16195
DNA (2082bp) protein (694aa)
Signal transduction histidine kinase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFP8_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CCY28378.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
histidine kinase
L3_108_000G1_scaffold_358_16
unknown

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16322..16480
DNA (159bp) protein (53aa)

This feature has no annotations

L3_108_000G1_scaffold_358_17
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16731..17195
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L1X3_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01738.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_108_000G1_scaffold_358_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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17250..17999
DNA (750bp) protein (250aa)
Polysaccharide deacetylase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HV12_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCY28376.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative hydrolase
L3_108_000G1_scaffold_358_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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17996..18994
DNA (999bp) protein (333aa)
Stage II sporulation protein D n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFP3_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:CCY28373.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
spoIID; stage II sporulation protein D
L3_108_000G1_scaffold_358_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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18991..19689
DNA (699bp) protein (233aa)
HAD hydrolase TIGR02254 family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HU95_9FIRM
HAD hydrolase TIGR02254 family {ECO:0000313|EMBL:CCY28372.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
HAD-superfamily hydrolase
L3_108_000G1_scaffold_358_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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19787..21601
DNA (1815bp) protein (605aa)
Repeat protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC8_9ACTN
Repeat protein {ECO:0000313|EMBL:EBA39132.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
muc4; Mucin-4
L3_108_000G1_scaffold_358_22
Lactococcus raffinolactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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21614..23527
DNA (1914bp) protein (638aa)
Internalin-like protein (LPXTG motif) Lmo0409 homolog n=1 Tax=Lactococcus raffinolactis 4877 RepID=I7LNG7_9LACT
Internalin-like protein (LPXTG motif) Lmo0409 homolog {ECO:0000313|EMBL:CCK18623.1}; TaxID=1215915 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus raffinolactis 4877.;"
hypothetical protein
L3_108_000G1_scaffold_358_23
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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23678..24349
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39263.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
cell surface glycoprotein 2
L3_108_000G1_scaffold_358_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(24481..25077)
DNA (597bp) protein (199aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HNP0_9FIRM
L3_108_000G1_scaffold_358_25
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25202..25486)
DNA (285bp) protein (95aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LP30_9FIRM
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EFU76348.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
RelE family toxin-antitoxin system toxin protein
L3_108_000G1_scaffold_358_26
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25483..25758)
DNA (276bp) protein (92aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LP31_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EFU76349.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein
L3_108_000G1_scaffold_358_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(25898..28519)
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H929_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26205.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_358_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(28543..29340)
DNA (798bp) protein (266aa)
rRNA methyltransferase (EC:2.1.1.-)
RNA methyltransferase TrmH family group 3 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQP5_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CCY26856.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_358_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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29612..31753
DNA (2142bp) protein (714aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ftsH; cell division protein FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Oscillibacter RepID=U2S1L9_9FIRM
L3_108_000G1_scaffold_358_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31802..33217)
DNA (1416bp) protein (472aa)
Pyridoxal-dependent decarboxylase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9J0_9CLOT
Pyridoxal-dependent decarboxylase domain protein {ECO:0000313|EMBL:EEG52017.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
glutamate decarboxylase
Displaying items 1-30 of 91 in total

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