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L3_108_000G1_scaffold_402

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_402_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..678)
DNA (678bp) protein (226aa)
Predicted transposase n=2 Tax=Clostridium kluyveri RepID=A5N8S0_CLOK5
Clostridium botulinum B2 450 plasmid p_B2_450, whole genome shotgun sequence {ECO:0000313|EMBL:KIS21583.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
hypothetical protein
L3_108_000G1_scaffold_402_2
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(804..3053)
DNA (2250bp) protein (750aa)
RecD/TraA family helicase n=3 Tax=Clostridium clostridioforme RepID=N9YLY2_9CLOT
RecD/TraA family helicase {ECO:0000313|EMBL:KEK23914.1}; TaxID=574375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus gaemokensis.;"
Putative ATP-dependent exoDNAse
L3_108_000G1_scaffold_402_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3079..3939)
DNA (861bp) protein (287aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DNA polymerase III, alpha subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRZ0_9FIRM
dnaE; DNA Polymerase III Alpha chain (dnaE)
L3_108_000G1_scaffold_402_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4305..6653)
DNA (2349bp) protein (783aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DNA polymerase III, alpha subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRZ0_9FIRM
DNA polymerase III subunit alpha
L3_108_000G1_scaffold_402_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6634..8352)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Bacillus licheniformis CG-B52 RepID=T5HIH3_BACLI
YorK protein {ECO:0000313|EMBL:BAO04763.1}; TaxID=1407017 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B str. Osaka05.;"
yorK; ssDNA-binding protein
L3_108_000G1_scaffold_402_6
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8523..9695)
DNA (1173bp) protein (391aa)
IS605 OrfB family transposase n=8 Tax=Bacillus smithii 7_3_47FAA RepID=G9QJT8_9BACI
IS605 OrfB family transposase {ECO:0000313|EMBL:EHL78577.1}; TaxID=665952 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
transposase
L3_108_000G1_scaffold_402_7
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9637..9996)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWE6_CLOSD
hypothetical protein
Transposase {ECO:0000313|EMBL:KGF14723.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus sp. MV1.;"
L3_108_000G1_scaffold_402_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10086..11156)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AS43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34877.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
DNA primase (bacterial type)
L3_108_000G1_scaffold_402_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11169..12710)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AER5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34878.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Phage replicative DNA helicase
L3_108_000G1_scaffold_402_10
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12714..13403)
DNA (690bp) protein (230aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH67889.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_108_000G1_scaffold_402_11
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(13462..14619)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z5A2_9CLOT
RecA-superfamily ATPases implicated in signal transduction {ECO:0000313|EMBL:CRH67888.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_108_000G1_scaffold_402_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14719..15780)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AS49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34882.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_108_000G1_scaffold_402_13
unknown

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comp(15862..16119)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_108_000G1_scaffold_402_14
unknown

Not on your lists

comp(16628..16735)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_108_000G1_scaffold_402_15
unknown

Not on your lists

comp(16746..17339)
DNA (594bp) protein (198aa)

This feature has no annotations

L3_108_000G1_scaffold_402_16
unknown

Not on your lists

comp(17317..17751)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_108_000G1_scaffold_402_17
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17741..18304)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Paenibacillus polymyxa RepID=UPI0002F19747
Uncharacterized protein {ECO:0000313|EMBL:GAF10717.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
L3_108_000G1_scaffold_402_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18298..18840)
DNA (543bp) protein (181aa)
Numod4 motif family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ28_9FIRM
Numod4 motif family protein {ECO:0000313|EMBL:CDD80334.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
numod4 motif family protein
L3_108_000G1_scaffold_402_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18933..20096)
DNA (1164bp) protein (388aa)
transposase n=1 Tax=Thermoanaerobacter indiensis RepID=UPI0003622CFD
Transposase {ECO:0000313|EMBL:CEQ01700.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
IS605 family transposase OrfB
L3_108_000G1_scaffold_402_20
unknown

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comp(20255..20482)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_108_000G1_scaffold_402_21
unknown

Not on your lists

comp(20530..21309)
DNA (780bp) protein (260aa)

This feature has no annotations

L3_108_000G1_scaffold_402_22
unknown

Not on your lists

comp(21302..21511)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_108_000G1_scaffold_402_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21698..22117)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum CTI-5 RepID=U7SGS2_FUSNU
Uncharacterised protein {ECO:0000313|EMBL:CEQ01643.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_108_000G1_scaffold_402_24
unknown

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comp(22184..22579)
DNA (396bp) protein (132aa)

This feature has no annotations

L3_108_000G1_scaffold_402_25
unknown

Not on your lists

comp(22758..23075)
DNA (318bp) protein (106aa)

This feature has no annotations

L3_108_000G1_scaffold_402_26
unknown

Not on your lists

comp(23079..23312)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_108_000G1_scaffold_402_27
unknown

Not on your lists

comp(23368..23583)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_108_000G1_scaffold_402_28
unknown

Not on your lists

comp(23584..23706)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_108_000G1_scaffold_402_29
unknown

Not on your lists

23788..24099
DNA (312bp) protein (104aa)

This feature has no annotations

L3_108_000G1_scaffold_402_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24308..24511)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY79675.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Displaying items 1-30 of 132 in total

View Taxonomy