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L3_108_000G1_scaffold_420

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_420_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..198)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AHT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47384.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_108_000G1_scaffold_420_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(540..890)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R7E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM87824.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_108_000G1_scaffold_420_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1231..4437
DNA (3207bp) protein (1069aa)
SNF2 family N-terminal domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90006.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SNF2-related protein
L3_108_000G1_scaffold_420_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4551..4772
DNA (222bp) protein (74aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31400.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_420_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4929..6920)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QY53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31399.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
internalin-like protein
L3_108_000G1_scaffold_420_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6933..11324)
DNA (4392bp) protein (1464aa)
Fibronectin type III domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4X3_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDS18725.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycoside hydrolase family 16
L3_108_000G1_scaffold_420_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11610..12449)
DNA (840bp) protein (280aa)
SIS domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N4X2_9FIRM
SIS domain protein {ECO:0000313|EMBL:EDS18724.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator
L3_108_000G1_scaffold_420_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12481..13476)
DNA (996bp) protein (332aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N4X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47377.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
regulatory protein (pfoS/R)
L3_108_000G1_scaffold_420_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13478..14842)
DNA (1365bp) protein (455aa)
MATE efflux family protein n=3 Tax=Erysipelotrichaceae RepID=B0N4X0_9FIRM
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CCZ31395.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
matE; MATE efflux family protein
L3_108_000G1_scaffold_420_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14842..15597)
DNA (756bp) protein (252aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=C3RPB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31394.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_108_000G1_scaffold_420_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16107..16583
DNA (477bp) protein (159aa)
Glutathione peroxidase n=5 Tax=Erysipelotrichaceae RepID=B0N4W8_9FIRM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glutathione peroxidase
L3_108_000G1_scaffold_420_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16772..17266
DNA (495bp) protein (165aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31392.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_108_000G1_scaffold_420_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17279..17641)
DNA (363bp) protein (121aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, cellobiose-specific, IIB component n=5 Tax=Erysipelotrichaceae RepID=B0N4W6_9FIRM
PTS system, cellobiose-specific, IIB component {ECO:0000313|EMBL:EDS18718.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_108_000G1_scaffold_420_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17869..18588)
DNA (720bp) protein (240aa)
N-acetylmuramoyl-L-alanine amidase CwlD n=4 Tax=Coprobacillus RepID=C3RPB1_9FIRM
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EHQ47371.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
N-acetylmuramoyl-L-alanine amidase
L3_108_000G1_scaffold_420_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18725..19585)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=4 Tax=Erysipelotrichaceae RepID=B0N4W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47370.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
AraC family transcriptional regulator
L3_108_000G1_scaffold_420_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19773..21704
DNA (1932bp) protein (644aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4W3_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS18715.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
diguanylate cyclase (GGDEF) domain
L3_108_000G1_scaffold_420_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21769..23715)
DNA (1947bp) protein (649aa)
licR3; putative licABCH operon regulator (EC:2.7.1.69 2.7.1.-)
HTH domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N4W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89991.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_108_000G1_scaffold_420_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23730..25166)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R528_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89990.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glycoside hydrolase
L3_108_000G1_scaffold_420_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25178..26104)
DNA (927bp) protein (309aa)
Mannose-6-phosphate isomerase, class I n=2 Tax=Coprobacillus RepID=G9R527_9FIRM
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EHM89989.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mannose-6-phosphate isomerase
L3_108_000G1_scaffold_420_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26144..26608)
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RPA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31427.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_420_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26620..27042)
DNA (423bp) protein (141aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31428.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_420_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27061..28374)
DNA (1314bp) protein (438aa)
PTS system, lactose/cellobiose family IIC component n=3 Tax=Coprobacillus RepID=C3RPA2_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_108_000G1_scaffold_420_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29126..29722)
DNA (597bp) protein (199aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89985.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_108_000G1_scaffold_420_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29724..30020)
DNA (297bp) protein (99aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35175.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ArsR family transcriptional regulator
L3_108_000G1_scaffold_420_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29995..30696)
DNA (702bp) protein (234aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35176.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_420_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30849..31589)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AHQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47359.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_108_000G1_scaffold_420_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31664..32092)
DNA (429bp) protein (143aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33030.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_108_000G1_scaffold_420_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32310..32837)
DNA (528bp) protein (176aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33029.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_108_000G1_scaffold_420_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(33002..33394)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=5 Tax=Erysipelotrichaceae RepID=B0N4T8_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SSU ribosomal protein S9P
L3_108_000G1_scaffold_420_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(33412..33849)
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=5 Tax=Erysipelotrichaceae RepID=B0N4T7_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
LSU ribosomal protein L13P
Displaying items 1-30 of 74 in total

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