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L3_108_000G1_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_485_1
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..388
DNA (387bp) protein (129aa)
Putative transposase YhgA-like n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GTM0_9FIRM
Putative transposase YhgA-like {ECO:0000313|EMBL:CDE30470.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Putative transposase, YhgA-like.
L3_108_000G1_scaffold_485_2
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(456..1376)
DNA (921bp) protein (307aa)
dTDP-glucose pyrophosphorylase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNT1_9FIRM
dTDP-glucose pyrophosphorylase
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CBL21492.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_108_000G1_scaffold_485_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1382..2419)
DNA (1038bp) protein (346aa)
Repeating unit O-acetyltransferase WefK n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EID9_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ97601.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_108_000G1_scaffold_485_4
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2534..3652)
DNA (1119bp) protein (373aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCU8_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDD87222.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_108_000G1_scaffold_485_5
unknown

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comp(3753..3869)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_108_000G1_scaffold_485_6
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3866..5329)
DNA (1464bp) protein (488aa)
Polysaccharide transporter PST family n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KCM2_9FIRM
Polysaccharide transporter PST family {ECO:0000313|EMBL:CDB67791.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
polysaccharide transporter
L3_108_000G1_scaffold_485_7
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5360..6625)
DNA (1266bp) protein (422aa)
Oligosaccharide repeat unit polymerase n=1 Tax=Lactobacillus johnsonii (strain FI9785) RepID=D0R4M1_LACJF
oligosaccharide repeat unit polymerase
Oligosaccharide repeat unit polymerase {ECO:0000313|EMBL:CAX67034.1}; TaxID=633699 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii (strain FI9785).;"
L3_108_000G1_scaffold_485_8
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(6643..7797)
DNA (1155bp) protein (385aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EPK8_9LACO
Uncharacterized protein {ECO:0000313|EMBL:KGE71322.1}; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
galactosyl transferase
L3_108_000G1_scaffold_485_9
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7811..8857)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GMH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE28226.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L3_108_000G1_scaffold_485_10
Lactobacillus equicursoris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8871..9839)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lactobacillus equicursoris CIP 110162 RepID=K0NYA5_9LACO
Uncharacterized protein {ECO:0000313|EMBL:CCK86336.1}; TaxID=1293597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162.;"
glycosyl transferase
L3_108_000G1_scaffold_485_11
Lactobacillus equicursoris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9856..10929)
DNA (1074bp) protein (358aa)
WfgE n=1 Tax=Lactobacillus equicursoris CIP 110162 RepID=K0NZL4_9LACO
WfgE {ECO:0000313|EMBL:CCK86335.1}; TaxID=1293597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162.;"
group 1 glycosyl transferase
L3_108_000G1_scaffold_485_12
Prevotella oralis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11256..11372)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Prevotella oralis CC98A RepID=V8C2G7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETD21583.1}; TaxID=1073367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oralis CC98A.;"
family 2 glycosyl transferase
L3_108_000G1_scaffold_485_13
Lactobacillus equicursoris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11372..12493)
DNA (1122bp) protein (374aa)
Glycosyltransferase n=1 Tax=Lactobacillus equicursoris CIP 110162 RepID=K0NUV7_9LACO
Glycosyltransferase {ECO:0000313|EMBL:CCK86334.1}; TaxID=1293597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162.;"
glycosyl transferases group 1,glycosyl transferase group 1
L3_108_000G1_scaffold_485_14
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12515..13678)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LCE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB79796.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_108_000G1_scaffold_485_15
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13680..14804)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GAR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23873.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_000G1_scaffold_485_16
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14815..15309)
DNA (495bp) protein (165aa)
Glycosyltransferase family 28 C-terminal domain protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KWX3_9FIRM
Glycosyltransferase family 28 C-terminal domain protein {ECO:0000313|EMBL:CDB79798.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
glycosyl transferase
L3_108_000G1_scaffold_485_17
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15332..15781)
DNA (450bp) protein (150aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Clostridium sp. CAG:590 RepID=R5EJ54_9CLOT
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:CCX88036.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
L3_108_000G1_scaffold_485_18
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16108..17343)
DNA (1236bp) protein (412aa)
Transposase and inactivated derivatives n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNU7_9FIRM
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBL21508.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_108_000G1_scaffold_485_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17655..18764
DNA (1110bp) protein (370aa)
Site-specific recombinase, phage integrase family n=1 Tax=Blautia sp. KLE 1732 RepID=U2DK05_9FIRM
Site-specific recombinase XerC {ECO:0000313|EMBL:CDE29823.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Site-specific recombinase XerC
L3_108_000G1_scaffold_485_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18953..19969)
DNA (1017bp) protein (339aa)
UDP-glucose-4-epimerase (EC:5.1.3.2)
UDP-glucose-4-epimerase n=3 Tax=Clostridiales RepID=D4LNV1_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ERI96692.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_108_000G1_scaffold_485_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20062..20985)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7GS03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29826.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
dTDP-glucose pyrophosphorylase
L3_108_000G1_scaffold_485_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21129..22484)
DNA (1356bp) protein (452aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBL21514.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNV3_9FIRM
L3_108_000G1_scaffold_485_23
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22481..23155)
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNV4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL21515.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_108_000G1_scaffold_485_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23313..25133)
DNA (1821bp) protein (607aa)
Na/Pi-cotransporter n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNV5_9FIRM
Na/Pi-cotransporter {ECO:0000313|EMBL:CBL21516.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Na/Pi-cotransporter
L3_108_000G1_scaffold_485_25
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25188..25442)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EPJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96687.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_108_000G1_scaffold_485_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25420..25920)
DNA (501bp) protein (167aa)
Transcription elongation factor GreA n=3 Tax=Clostridiales RepID=D4LNV6_9FIRM
Transcription elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_108_000G1_scaffold_485_27
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26057..26590)
DNA (534bp) protein (178aa)
Transcriptional regulators, similar to M. xanthus CarD n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNV8_9FIRM
Transcriptional regulators, similar to M. xanthus CarD
Transcriptional regulators, similar to M. xanthus CarD {ECO:0000313|EMBL:CBL21519.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_108_000G1_scaffold_485_28
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26807..29821)
DNA (3015bp) protein (1005aa)
Small GTP-binding protein domain n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNV9_9FIRM
Small GTP-binding protein domain {ECO:0000313|EMBL:CBL21520.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
small GTP-binding protein domain
L3_108_000G1_scaffold_485_29
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29906..30775)
DNA (870bp) protein (290aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQY9_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:ERI96681.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_108_000G1_scaffold_485_30
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30897..32453)
DNA (1557bp) protein (519aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNW2_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBL21523.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
ATPase components of ABC transporters with duplicated ATPase domains
Displaying items 1-30 of 69 in total

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