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L3_108_000G1_scaffold_602

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_602_1
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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38..793
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MSH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFI41974.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
Hypothetical protein
L3_108_000G1_scaffold_602_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(866..2062)
DNA (1197bp) protein (399aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase prokaryotic n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUD3_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase prokaryotic {ECO:0000313|EMBL:CCY28111.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_602_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(2122..2517)
DNA (396bp) protein (132aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEH1_9FIRM
L3_108_000G1_scaffold_602_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(2519..3370)
DNA (852bp) protein (284aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF25_9FIRM
L3_108_000G1_scaffold_602_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(3404..4279)
DNA (876bp) protein (292aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
panB; putative 3-methyl-2-oxobutanoate hydroxymethyltransferas (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUC8_9FIRM
L3_108_000G1_scaffold_602_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(4276..5136)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28104.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_602_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5428..5871)
DNA (444bp) protein (148aa)
Sigma-70, region 4 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPX5_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:ERI73611.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_108_000G1_scaffold_602_8
unknown

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comp(5831..6049)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_108_000G1_scaffold_602_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(6559..6993)
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
3-dehydroquinate dehydratase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJ23_9FIRM
dehydroquinase class II
L3_108_000G1_scaffold_602_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(6965..8206)
DNA (1242bp) protein (414aa)
aroE_aroK; shikimate dehydrogenase/shikimate kinase (EC:1.1.1.25 2.7.1.71)
Shikimate kinase 2 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTG8_9FIRM
Shikimate kinase 2 {ECO:0000313|EMBL:CCY28092.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_602_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(8206..9351)
DNA (1146bp) protein (382aa)
Chorismate mutase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEF8_9FIRM
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:CCY28090.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_602_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9355..10458)
DNA (1104bp) protein (368aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
aroC; Chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF9_9FIRM
L3_108_000G1_scaffold_602_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(10496..11770)
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEF1_9FIRM
L3_108_000G1_scaffold_602_14
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(11767..12825)
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EUN8_9FIRM
L3_108_000G1_scaffold_602_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(12822..13658)
DNA (837bp) protein (279aa)
Prephenate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMX5_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:CCY26132.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
prephenate dehydrogenase
L3_108_000G1_scaffold_602_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(13655..14662)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26133.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
phospho-2-dehydro-3-deoxyheptonate aldolase
L3_108_000G1_scaffold_602_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15022..16425)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DTG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ61067.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Predicted ATPase (AAA+ superfamily)
L3_108_000G1_scaffold_602_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(16581..17810)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26768.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_602_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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18079..19245
DNA (1167bp) protein (389aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPI5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY26767.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
transcriptional regulator
L3_108_000G1_scaffold_602_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(19323..20600)
DNA (1278bp) protein (426aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22644.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_108_000G1_scaffold_602_21
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20623..21180)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GJ25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI55429.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
hypothetical protein
L3_108_000G1_scaffold_602_22
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(21439..22560)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26770.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
metallophosphoesterase
L3_108_000G1_scaffold_602_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(22572..23516)
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF75_9FIRM
L3_108_000G1_scaffold_602_24
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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23712..25337
DNA (1626bp) protein (542aa)
Stage V sporulation protein B n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MM32_9FIRM
Stage V sporulation protein B {ECO:0000313|EMBL:CDB99775.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
polysaccharide biosynthesis protein
L3_108_000G1_scaffold_602_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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25473..25781
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQG3_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rplU; 50S ribosomal protein L21
L3_108_000G1_scaffold_602_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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25781..26110
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26772.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_602_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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26114..26401
DNA (288bp) protein (96aa)
50S ribosomal protein L27 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB70_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rpmA; 50S ribosomal protein L27
L3_108_000G1_scaffold_602_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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26490..27770
DNA (1281bp) protein (427aa)
GTPase Obg n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF79_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
obg; GTP-binding protein Obg
L3_108_000G1_scaffold_602_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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27918..28064
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HN87_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:CCY26257.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_602_30
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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28154..29533
DNA (1380bp) protein (460aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HNT9_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CCY26256.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
Displaying items 1-30 of 65 in total

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