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L3_108_000G1_scaffold_5016

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_5016_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..757
DNA (756bp) protein (252aa)
ComE operon protein 3 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRQ7_CLOSH
comEC1; ComE operon protein 3
ComE operon protein 3 {ECO:0000313|EMBL:AGC68248.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_108_000G1_scaffold_5016_2
unknown

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comp(754..1398)
DNA (645bp) protein (215aa)

This feature has no annotations

L3_108_000G1_scaffold_5016_3
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1431..2438
DNA (1008bp) protein (336aa)
PilT n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNB7_CLOSH
pilT; PilT
Twitching mobility protein PilT {ECO:0000313|EMBL:AGC68252.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_108_000G1_scaffold_5016_4
Bifidobacterium gallicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2452..3108
DNA (657bp) protein (219aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTW3_9BIFI
Beta-phosphoglucomutase {ECO:0000313|EMBL:KFI58836.1}; HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFA23167.1}; TaxID=561180 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallicum DSM 20093 = LMG 11596.;"
HAD superfamily hydrolase
L3_108_000G1_scaffold_5016_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3171..4397
DNA (1227bp) protein (409aa)
proposed homoserine kinase (EC:5.4.2.1)
Putative homoserine kinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBY3_9FIRM
Putative homoserine kinase {ECO:0000313|EMBL:EDS11108.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_108_000G1_scaffold_5016_6
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4700..5410
DNA (711bp) protein (237aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UIG2_9FIRM
L3_108_000G1_scaffold_5016_7
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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5389..6876
DNA (1488bp) protein (496aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
menE; O-succinylbenzoate-CoA ligase (EC:6.2.1.26)
O-succinylbenzoate-CoA ligase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UHC9_9FIRM
L3_108_000G1_scaffold_5016_8
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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6927..7313
DNA (387bp) protein (129aa)
Putative esterase HI_1161 {ECO:0000313|EMBL:CRH88504.1}; EC=3.1.2.- {ECO:0000313|EMBL:CRH88504.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YLI5_9ACTN
hypothetical protein
L3_108_000G1_scaffold_5016_9
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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7300..7689
DNA (390bp) protein (130aa)
2-oxoglutarate translocator n=1 Tax=Erwinia carotovora RepID=UPI0001A44236
Putative sodium:sulfate symporter {ECO:0000313|EMBL:CRH88506.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
anion transporter
L3_108_000G1_scaffold_5016_10
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7871..8623
DNA (753bp) protein (251aa)
Sodium:sulfate symporter transmembrane region n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UH33_9FIRM
Sodium:sulfate symporter transmembrane region {ECO:0000313|EMBL:ERT58640.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
anion transporter
Displaying 10 items

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