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L3_108_000G1_scaffold_1340

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_1340_1
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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290..1639
DNA (1350bp) protein (450aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFM7_9FIRM
4-hydroxybutyrate CoA-transferase
4-hydroxybutyrate CoA-transferase {ECO:0000313|EMBL:AHF08006.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
L3_108_000G1_scaffold_1340_2
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1932..2318
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RD86_ANAPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV29149.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L3_108_000G1_scaffold_1340_3
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2405..3106
DNA (702bp) protein (234aa)
Sortase, SrtB family {ECO:0000313|EMBL:ERT64974.1}; EC=3.4.22.71 {ECO:0000313|EMBL:ERT64974.1};; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
Sortase, SrtB family n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7V1D3_9FIRM
srtB; sortase
L3_108_000G1_scaffold_1340_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3198..3935
DNA (738bp) protein (246aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Dorea sp. CAG:317 RepID=R6WN40_9FIRM
Bile acid 7-dehydroxylase 1/3 {ECO:0000313|EMBL:CDD08324.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_108_000G1_scaffold_1340_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4026..4292)
DNA (267bp) protein (89aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6T8_FINMA
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EFH93792.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
RelE/StbE family addiction module toxin
L3_108_000G1_scaffold_1340_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4292..4549)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MUG6_9FIRM
AbrB family transcriptional regulator {ECO:0000313|EMBL:KGF08598.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
AbrB family transcriptional regulator
L3_108_000G1_scaffold_1340_7
unknown

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5038..5658
DNA (621bp) protein (207aa)

This feature has no annotations

L3_108_000G1_scaffold_1340_8
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5870..6715
DNA (846bp) protein (282aa)
Pirin-related protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y3F5_9FIRM
pirin
Pirin domain protein {ECO:0000313|EMBL:ACL77060.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L3_108_000G1_scaffold_1340_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6936..7964
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NM58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12330.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_108_000G1_scaffold_1340_10
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8007..10754)
DNA (2748bp) protein (916aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ABC19468.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABC19468.1};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037C3A3A
L3_108_000G1_scaffold_1340_11
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10751..11995)
DNA (1245bp) protein (415aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036CFF56
ahcY; S-adenosyl-L-homocysteine hydrolase
L3_108_000G1_scaffold_1340_12
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12182..13096
DNA (915bp) protein (305aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Aspartate carbamoyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKS7_DESK7
L3_108_000G1_scaffold_1340_13
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13098..14399
DNA (1302bp) protein (434aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YVG1_9ACTN
L3_108_000G1_scaffold_1340_14
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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14396..15172
DNA (777bp) protein (259aa)
oxidoreductase n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A9165A
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_108_000G1_scaffold_1340_15
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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15165..16106
DNA (942bp) protein (314aa)
Dihydroorotate dehydrogenase n=1 Tax=Thermincola potens (strain JR) RepID=D5X7V7_THEPJ
dihydroorotate dehydrogenase family protein
Tax=BJP_IG2158_Thermincola_46_17
L3_108_000G1_scaffold_1340_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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16096..16812
DNA (717bp) protein (239aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=3885285 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
L3_108_000G1_scaffold_1340_17
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16809..17393
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPN5_9FIRM
L3_108_000G1_scaffold_1340_18
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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17390..18661
DNA (1272bp) protein (424aa)
GTPase HflX n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIJ0_DESK7
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
L3_108_000G1_scaffold_1340_19
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18691..19965
DNA (1275bp) protein (425aa)
Aluminum resistance family protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J5P8_DESRM
Uncharacterized protein {ECO:0000313|EMBL:KJS22387.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
aluminium resistance family protein
L3_108_000G1_scaffold_1340_20
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19968..20453
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFD2_THEPJ
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
L3_108_000G1_scaffold_1340_21

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20456..21556
DNA (1101bp) protein (367aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=DDL_NATTJ
L3_108_000G1_scaffold_1340_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21556..22722
DNA (1167bp) protein (389aa)
recA; recombinase A (EC:3.6.3.8)
recombinase RecA n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000362F211
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
L3_108_000G1_scaffold_1340_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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22719..23153
DNA (435bp) protein (145aa)
Regulatory protein RecX n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PY03_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
regulatory protein RecX
L3_108_000G1_scaffold_1340_24
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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23347..24885
DNA (1539bp) protein (513aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
Ribonuclease Y n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPP5_9FIRM
RNA binding metal dependent phosphohydrolase
L3_108_000G1_scaffold_1340_25
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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25054..26328
DNA (1275bp) protein (425aa)
FAD-dependent oxidoreductase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B6FC85
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CFX85537.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
NAD(FAD)-utilizing dehydrogenase
L3_108_000G1_scaffold_1340_26
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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26319..26975
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000362406A
cytidylate kinase
L3_108_000G1_scaffold_1340_27
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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27048..29081
DNA (2034bp) protein (678aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Thermincola potens (strain JR) RepID=D5XFM1_THEPJ
hydroxymethylbutenyl pyrophosphate reductase
L3_108_000G1_scaffold_1340_28
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29334..29783
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L783_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE83087.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
hypothetical protein
L3_108_000G1_scaffold_1340_29
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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29792..30727
DNA (936bp) protein (312aa)
N utilization substance protein B homolog n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JMK8_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
nusb antitermination factor
L3_108_000G1_scaffold_1340_30
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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30724..31941
DNA (1218bp) protein (406aa)
xseA; putative exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQ85_SELRL
Displaying items 1-30 of 33 in total

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