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L3_108_000G1_scaffold_1400

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_1400_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1664)
DNA (1662bp) protein (554aa)
Putative biofilm-associated surface protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S311_FINM2
putative biofilm-associated surface protein
Putative biofilm-associated surface protein {ECO:0000313|EMBL:BAG08751.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
L3_108_000G1_scaffold_1400_2
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1687..5154)
DNA (3468bp) protein (1156aa)
Uncharacterized protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S312_FINM2
Uncharacterized protein {ECO:0000313|EMBL:KGF15152.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus sp. MV1.;"
hypothetical protein
L3_108_000G1_scaffold_1400_3
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6207..6392)
DNA (186bp) protein (62aa)
Rubredoxin n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BV21_DESAD
rubredoxin-type Fe(Cys)4 protein
Tax=CG_Syntroph_02
L3_108_000G1_scaffold_1400_4
unknown

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comp(6473..6583)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_108_000G1_scaffold_1400_5
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6580..7512)
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Thioredoxin reductase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RFT7_MOOTA
thioredoxin reductase
L3_108_000G1_scaffold_1400_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7858..8280
DNA (423bp) protein (141aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCK8_9FIRM
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:CDE35932.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ferric uptake regulator, Fur family
L3_108_000G1_scaffold_1400_7
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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8291..9472
DNA (1182bp) protein (394aa)
ABC transporter, substrate-binding protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TCA4_9FIRM
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EGL38747.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_108_000G1_scaffold_1400_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

9541..10221
DNA (681bp) protein (227aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC-type Mn/Zn transport systems ATPase component n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6X4_9FIRM
ABC-type Mn/Zn transport systems ATPase component {ECO:0000313|EMBL:CDB29301.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_108_000G1_scaffold_1400_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10218..11039
DNA (822bp) protein (274aa)
ABC 3 transport family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AJ70_9CLOT
ABC 3 transport family protein {ECO:0000313|EMBL:ERI65899.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L3_108_000G1_scaffold_1400_10
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11185..11601)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XD53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14550.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
hypothetical protein
L3_108_000G1_scaffold_1400_11
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(11642..11830)
DNA (189bp) protein (63aa)
Toxin-antitoxin system, toxin component, HicA family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GMY5_9FUSO
Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EEY34545.1}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia goodfellowii F0264.;"
putative phage protein-related protein
L3_108_000G1_scaffold_1400_12
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12011..12520)
DNA (510bp) protein (170aa)
CBS-domain-containing membrane protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9THF7_9CYAN
hypothetical protein
CBS-domain-containing membrane protein {ECO:0000313|EMBL:AFY81459.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
L3_108_000G1_scaffold_1400_13
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12594..13433)
DNA (840bp) protein (280aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9N2_9FIRM
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:EDR99004.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_108_000G1_scaffold_1400_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13507..14286)
DNA (780bp) protein (260aa)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EEG90238.1}; EC=4.2.1.55 {ECO:0000313|EMBL:EEG90238.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
3-hydroxybutyryl-CoA dehydratase n=2 Tax=Coprococcus RepID=C0B8K1_9FIRM
crt; 3-hydroxybutyryl-CoA dehydratase
L3_108_000G1_scaffold_1400_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14341..15522)
DNA (1182bp) protein (394aa)
thlA2; thiolase ThlA2 (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B3F4F3
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EGN32832.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_1400_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(16228..17208)
DNA (981bp) protein (327aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Lipoate--protein ligase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LU59_9FIRM
lipoyltransferase and lipoate-protein ligase
L3_108_000G1_scaffold_1400_17
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(17205..18065)
DNA (861bp) protein (287aa)
lipoic acid synthetase (EC:2.8.1.8)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037B6333
Tax=Caldatribacterium californiense
L3_108_000G1_scaffold_1400_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(18052..18294)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWV1_9FIRM
TPP-dependent acetoin dehydrogenase complex E2 component dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:CDB87196.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
pdhC; pyruvate dehydrogenase
L3_108_000G1_scaffold_1400_19
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18329..19270)
DNA (942bp) protein (314aa)
Lipoyltransferase and lipoate-protein ligase n=2 Tax=Oribacterium RepID=G9WQ35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10468.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
lipoyltransferase and lipoate-protein ligase
L3_108_000G1_scaffold_1400_20
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(19386..20246)
DNA (861bp) protein (287aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094309};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Pantothenate synthetase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QFU5_9FIRM
pantoate--beta-alanine ligase
L3_108_000G1_scaffold_1400_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20243..21097)
DNA (855bp) protein (285aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZG26_EUBR3
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
L3_108_000G1_scaffold_1400_22
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21081..22100)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI00038187E8
Uncharacterized protein {ECO:0000313|EMBL:KFC97379.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
hypothetical protein
L3_108_000G1_scaffold_1400_23
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22162..23298)
DNA (1137bp) protein (379aa)
Stage II sporulation protein E (SpoIIE) n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K6R5_HALHC
Stage II sporulation protein E (SpoIIE)
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:AGB40059.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
L3_108_000G1_scaffold_1400_24
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23300..25003)
DNA (1704bp) protein (568aa)
Putative PAS/PAC sensor protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJU2_DESK7
PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:AEG16435.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
L3_108_000G1_scaffold_1400_25
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(25006..25257)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H8L6_ILYPC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO82998.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
L3_108_000G1_scaffold_1400_26
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25374..27134)
DNA (1761bp) protein (587aa)
Hydrogenase, Fe-only n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B7Y7_THEAS
hydrogenase
Tax=BJP_IG2102_Clostridiales_34_350
L3_108_000G1_scaffold_1400_27

Not on your lists

comp(27155..28636)
DNA (1482bp) protein (494aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit n=1 Tax=uncultured bacterium URE4 RepID=C0JZZ5_9BACT
NADH:ubiquinone oxidoreductase subunit {ECO:0000313|EMBL:ACM91025.1}; TaxID=581112 species="Bacteria; environmental samples.;" source="uncultured bacterium URE4.;"
L3_108_000G1_scaffold_1400_28
MPF_Petrotoga_mobilis_34_12, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(28636..29028)
DNA (393bp) protein (131aa)
Uncharacterized protein id=4140915 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
NADP-reducing hydrogenase subunit B
Tax=MPF_Petrotoga_mobilis_34_12
L3_108_000G1_scaffold_1400_29
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29003..29524)
DNA (522bp) protein (174aa)
NAD-dependent formate dehydrogenase gamma subunit n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RTF3_9CLOT
NAD-dependent formate dehydrogenase gamma subunit {ECO:0000313|EMBL:CDF58538.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
hymA; iron-only hydrogenase, electron-transferring subunit
L3_108_000G1_scaffold_1400_30
unknown

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comp(29962..30582)
DNA (621bp) protein (207aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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