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L3_108_000G1_scaffold_2168

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_2168_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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256..1074
DNA (819bp) protein (273aa)
Tetratricopeptide repeat protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENB8_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDB02068.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Tetratricopeptide repeat.
L3_108_000G1_scaffold_2168_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1071..2012
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9MNC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72634.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_108_000G1_scaffold_2168_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2022..2612
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9MNJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72635.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_108_000G1_scaffold_2168_4
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2605..3438
DNA (834bp) protein (278aa)
Putative Transcriptional regulatory protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP30_9CLOT
MerR family transcriptional regulator {ECO:0000313|EMBL:KEZ85350.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
transcriptional regulatory protein
L3_108_000G1_scaffold_2168_5
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3667..4026
DNA (360bp) protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNI4_DESK7
NAD(P)H-quinone oxidoreductase subunit 3
L3_108_000G1_scaffold_2168_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4017..4577
DNA (561bp) protein (187aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
NADH dehydrogenase subunit B (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit B n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6I0_9CLOT
L3_108_000G1_scaffold_2168_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4578..5000
DNA (423bp) protein (141aa)
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
NADH-quinone oxidoreductase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EFU3_CLOPA
L3_108_000G1_scaffold_2168_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5016..6221
DNA (1206bp) protein (402aa)
NADH-quinone oxidoreductase subunit D {ECO:0000255|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000255|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000255|HAMAP-Rule:MF_01358}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
NADH-quinone oxidoreductase subunit D n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=NUOD_CLOB8
NADH dehydrogenase subunit D
L3_108_000G1_scaffold_2168_9
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6233..7273
DNA (1041bp) protein (347aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FV33_CLOPA
NADH dehydrogenase (quinone)
L3_108_000G1_scaffold_2168_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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7287..7874
DNA (588bp) protein (196aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
nuoI; NADH-ubiquinone oxidoreductase chain I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=3 Tax=Dehalobacter RepID=K4L6R7_9FIRM
L3_108_000G1_scaffold_2168_11
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7874..8383
DNA (510bp) protein (170aa)
ndhJ; NADH-ubiquinone oxidoreductase chain J (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003779EFD
NADH-ubiquinone oxidoreductase {ECO:0000313|EMBL:AHF09436.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_108_000G1_scaffold_2168_12
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8380..8688
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
NADH-quinone oxidoreductase subunit K n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJU0_MOOTA
NADH-ubiquinone oxidoreductase, chain 4L
L3_108_000G1_scaffold_2168_13
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8707..10602
DNA (1896bp) protein (632aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH dehydrogenase subunit L n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJT9_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68322.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
L3_108_000G1_scaffold_2168_14
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10603..12132
DNA (1530bp) protein (510aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
NADH dehydrogenase subunit M {ECO:0000313|EMBL:ABC19301.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABC19301.1};; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
NADH dehydrogenase subunit M n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJT8_MOOTA
L3_108_000G1_scaffold_2168_15
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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12132..13568
DNA (1437bp) protein (479aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=NUON_MOOTA
L3_108_000G1_scaffold_2168_16
Brevibacterium mcbrellneri, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14419..16026)
DNA (1608bp) protein (536aa)
Phosphate transporter family protein n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YMM6_9MICO
Phosphate transporter family protein {ECO:0000313|EMBL:EFG47544.1}; TaxID=585530 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium mcbrellneri ATCC 49030.;"
phosphate/sulfate permease
L3_108_000G1_scaffold_2168_17
Carnobacterium sp. WN1359, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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16671..17861
DNA (1191bp) protein (397aa)
Glycine/betaine ABC transporter ATP-binding protein n=1 Tax=Carnobacterium sp. WN1359 RepID=U5S8X0_9LACT
glycine/betaine ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AGY81511.1}; TaxID=1266845 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. WN1359.;"
L3_108_000G1_scaffold_2168_18
Carnobacterium sp. WN1359, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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17865..18515
DNA (651bp) protein (217aa)
Choline ABC transporter permease n=1 Tax=Carnobacterium sp. WN1359 RepID=U5SCE0_9LACT
choline ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:AGY81512.1}; TaxID=1266845 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. WN1359.;"
L3_108_000G1_scaffold_2168_19
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18515..19450
DNA (936bp) protein (312aa)
Glycine betaine/carnitine/choline-binding protein n=1 Tax=Peptoniphilus sp. oral taxon 836 str. F0141 RepID=D8FJJ3_9FIRM
Glycine betaine/carnitine/choline-binding protein {ECO:0000313|EMBL:EFK38708.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
glycine/betaine ABC transporter substrate-binding protein
L3_108_000G1_scaffold_2168_20
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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19450..20118
DNA (669bp) protein (223aa)
Glycine betaine/carnitine/choline transport system permease protein OpuCD n=1 Tax=Carnobacterium sp. (strain 17-4) RepID=F4BPW5_CARS1
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD {ECO:0000313|EMBL:EXJ24246.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
opuCD; glycine betaine/carnitine/choline transport system permease protein OpuCD
L3_108_000G1_scaffold_2168_21
Bacillus badius, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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20115..20801
DNA (687bp) protein (229aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1455 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus badius.;"
ung; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AJJ4_BACPU
L3_108_000G1_scaffold_2168_22
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20951..21481
DNA (531bp) protein (177aa)
Phosphomethylpyrimidine kinase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JEE7_9CLOT
phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AEY66521.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Displaying 22 items

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