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L3_108_000G1_scaffold_2332

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_2332_1
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..430)
DNA (429bp) protein (143aa)
Formate C-acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7T4_9CLOT
Formate acetyltransferase {ECO:0000313|EMBL:KEZ87773.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
pyruvate formate-lyase PFL
L3_108_000G1_scaffold_2332_2
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(448..1956)
DNA (1509bp) protein (503aa)
acetaldehyde dehydrogenase (EC:1.2.1.-)
Predicted acetaldehyde dehydrogenase {ECO:0000313|EMBL:ADK17008.1}; EC=1.2.1.- {ECO:0000313|EMBL:ADK17008.1};; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
Predicted acetaldehyde dehydrogenase n=2 Tax=Clostridium RepID=D8GID4_CLOLD
L3_108_000G1_scaffold_2332_3
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1977..2279)
DNA (303bp) protein (101aa)
Predicted microcompartment shellprotein n=2 Tax=Clostridium RepID=D8GID5_CLOLD
microcompartment shellprotein
Microcompartments protein {ECO:0000313|EMBL:AGY76050.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L3_108_000G1_scaffold_2332_4
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2289..2591)
DNA (303bp) protein (101aa)
BMC domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHF00464.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
microcompartment shellprotein
L3_108_000G1_scaffold_2332_5
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2600..2878)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J9N1_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO51784.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L3_108_000G1_scaffold_2332_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2891..3994)
DNA (1104bp) protein (368aa)
Membrane spanning protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TW58_9CLOT
Membrane spanning protein {ECO:0000313|EMBL:CCZ63226.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_108_000G1_scaffold_2332_7
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4498..4917)
DNA (420bp) protein (140aa)
F0F1 ATP synthase subunit epsilon n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037E22B2
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
atpC; F0F1 ATP synthase subunit epsilon
L3_108_000G1_scaffold_2332_8
Peptococcus niger, Peptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4926..6359)
DNA (1434bp) protein (478aa)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; Flags: Fragment;; TaxID=2741 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Peptococcus.;" source="Peptococcus niger.;"
ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta (Fragment) n=1 Tax=Peptococcus niger RepID=ATPB_PEPNI
L3_108_000G1_scaffold_2332_9
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6378..7256)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000373FEB2
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
atpG; F-ATPase gamma subunit AtpG
L3_108_000G1_scaffold_2332_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7271..8785)
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=ATPA_DESHD
L3_108_000G1_scaffold_2332_11
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8782..9348)
DNA (567bp) protein (189aa)
ATP synthase subunit delta n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJS1_SYNLT
ATP synthase F1 subunit delta
Tax=BJP_08E140C01_Clostridiales_46_19
L3_108_000G1_scaffold_2332_12
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9345..9839)
DNA (495bp) protein (165aa)
atpF; ATP synthase F0 complex subunit beta (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIT5_THEPS
Tax=S_Thermoanaerobacterales_50_218
L3_108_000G1_scaffold_2332_13
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9887..10123)
DNA (237bp) protein (79aa)
atpE; ATP synthase F0 subunit C (EC:3.6.3.14)
ATP synthase subunit c n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=ATPL_CARHZ
Tax=BJP_08E140C01_Clostridiales_46_19
L3_108_000G1_scaffold_2332_14
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10170..10877)
DNA (708bp) protein (236aa)
ATP synthase subunit a n=1 Tax=Thermincola potens (strain JR) RepID=D5XDH9_THEPJ
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ATP synthase F0 subunit A
L3_108_000G1_scaffold_2332_15
unknown

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comp(10882..11142)
DNA (261bp) protein (87aa)

This feature has no annotations

L3_108_000G1_scaffold_2332_16
unknown

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comp(11139..11447)
DNA (309bp) protein (103aa)

This feature has no annotations

L3_108_000G1_scaffold_2332_17
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11518..12609)
DNA (1092bp) protein (364aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UPI0003D59FBA related cluster n=1 Tax=unknown RepID=UPI0003D59FBA
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ETJ14580.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
L3_108_000G1_scaffold_2332_18
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12657..12986)
DNA (330bp) protein (110aa)
Nucleotide pyrophosphohydrolase domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A936_CARHZ
nucleotide pyrophosphohydrolase domain-containing protein
Nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:ABB14256.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
L3_108_000G1_scaffold_2332_19
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13263..13751
DNA (489bp) protein (163aa)
comEB; ComE operon protein 2 (EC:3.5.-.-)
Deoxycytidylate deaminase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y8H5_CLOSH
DCMP deaminase {ECO:0000313|EMBL:GAE87285.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L3_108_000G1_scaffold_2332_20
unknown

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comp(13804..14262)
DNA (459bp) protein (153aa)

This feature has no annotations

L3_108_000G1_scaffold_2332_21
unknown

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14449..14880
DNA (432bp) protein (144aa)

This feature has no annotations

L3_108_000G1_scaffold_2332_22
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(14939..15691)
DNA (753bp) protein (251aa)
Sig b/f/g subfamily RNA polymerase sigma-28 subunit n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LFF2_9ACTO
sig b/f/g subfamily RNA polymerase sigma-28 subunit
Sig b/f/g subfamily RNA polymerase sigma-28 subunit {ECO:0000313|EMBL:AGL18062.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
L3_108_000G1_scaffold_2332_23
unknown

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comp(15708..16088)
DNA (381bp) protein (127aa)

This feature has no annotations

L3_108_000G1_scaffold_2332_24
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16066..16485)
DNA (420bp) protein (140aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0F2_NATTJ
cobalamin (vitamin B12) biosynthesis CbiX protein
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ACB84513.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
L3_108_000G1_scaffold_2332_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(16756..16971)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GXM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22135.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Transcriptional regulator
L3_108_000G1_scaffold_2332_26
unknown

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17072..17428
DNA (357bp) protein (119aa)

This feature has no annotations

L3_108_000G1_scaffold_2332_27
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17474..18106)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS23324.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
L3_108_000G1_scaffold_2332_28
Bacillus thermotolerans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18178..19095)
DNA (918bp) protein (306aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1221996 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermotolerans.;"
ketopantoate reductase (EC:1.1.1.169)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002FB06AB
L3_108_000G1_scaffold_2332_29
unknown

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comp(19361..19657)
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying 29 items

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