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L3_108_000G1_scaffold_793

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_793_1
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..372)
DNA (372bp) protein (124aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LV72_9FIRM
CRISPR-associated endoribonuclease Cas2 {ECO:0000313|EMBL:EFD93799.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1 str. 28L.;"
DNA polymerase III subunit alpha
L3_108_000G1_scaffold_793_2
Streptococcus sobrinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(374..1327)
DNA (954bp) protein (318aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1227275 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sobrinus W1703.;"
CRISPR-associated protein Cse1 n=1 Tax=Streptococcus sobrinus RepID=UPI0002F187EC
CRISPR-associated protein
L3_108_000G1_scaffold_793_3
Streptococcus ratti, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1332..1967)
DNA (636bp) protein (212aa)
Transcriptional regulator n=1 Tax=Streptococcus ratti FA-1 = DSM 20564 RepID=J3A256_STRRT
Transcriptional regulator {ECO:0000313|EMBL:EMP69809.1}; TaxID=699248 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus ratti FA-1 = DSM 20564.;"
hypothetical protein
L3_108_000G1_scaffold_793_4
Tetragenococcus muriaticus, Tetragenococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1969..2640)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Streptococcus salivarius RepID=F8HD90_STRE5
CRISPR-associated CT1976 family protein {ECO:0000313|EMBL:KFN89069.1}; TaxID=1302648 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Tetragenococcus.;" source="Tetragenococcus muriaticus 3MR10-3.;"
hypothetical protein
L3_108_000G1_scaffold_793_5
Tetragenococcus muriaticus, Tetragenococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2687..3787)
DNA (1101bp) protein (367aa)
CRISPR system CASCADE complex protein CasC n=1 Tax=Streptococcus sobrinus W1703 RepID=U2IPQ5_9STRE
CRISPR-associated CT1975 family protein {ECO:0000313|EMBL:KFN89070.1}; TaxID=1302648 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Tetragenococcus.;" source="Tetragenococcus muriaticus 3MR10-3.;"
hypothetical protein
L3_108_000G1_scaffold_793_6
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3780..4424)
DNA (645bp) protein (215aa)
CRISPR system CASCADE complex protein CasB n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LV77_9FIRM
CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFD93804.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1 str. 28L.;"
hypothetical protein
L3_108_000G1_scaffold_793_7
Tetragenococcus muriaticus, Tetragenococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4435..6126)
DNA (1692bp) protein (564aa)
CRISPR system CASCADE complex protein CasA n=2 Tax=Lactobacillus iners RepID=E3BVU8_9LACO
CRISPR-associated Cse1 family protein {ECO:0000313|EMBL:KFN89072.1}; TaxID=1302648 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Tetragenococcus.;" source="Tetragenococcus muriaticus 3MR10-3.;"
casA; CRISPR system CASCADE complex protein CasA
L3_108_000G1_scaffold_793_8
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6131..8902)
DNA (2772bp) protein (924aa)
Putative helicase n=1 Tax=Streptococcus salivarius PS4 RepID=I0QKI7_STRSL
Putative helicase {ECO:0000313|EMBL:EIC81797.1}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
helicase
L3_108_000G1_scaffold_793_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9210..9668)
DNA (459bp) protein (153aa)
ASCH domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6X5_FINMA
ASCH domain protein {ECO:0000313|EMBL:EFH93829.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein
L3_108_000G1_scaffold_793_10
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10259..15709
DNA (5451bp) protein (1817aa)
Conserved domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MUI9_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EGS30343.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
LPXTG-motif cell wall anchor domain-containing protein
L3_108_000G1_scaffold_793_11
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15871..16092)
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Gardnerella vaginalis JCP8066 RepID=S4IYP7_GARVA
HTH-type transcriptional regulator immR {ECO:0000313|EMBL:CRH60476.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
DNA-binding helix-turn-helix protein
L3_108_000G1_scaffold_793_12
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16128..17423)
DNA (1296bp) protein (432aa)
GHKL domain protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UEE5_9FIRM
GHKL domain protein {ECO:0000313|EMBL:ERT57244.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
two-component sensor histidine kinase
L3_108_000G1_scaffold_793_13
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17426..18121)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7V220_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERT65184.1}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
two-component response regulator
L3_108_000G1_scaffold_793_14
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18254..19147
DNA (894bp) protein (298aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM25138.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM25138.1};; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
ABC transporter, ATP-binding protein n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NM83_9FIRM
ABC transporter-like protein
L3_108_000G1_scaffold_793_15
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19149..19901
DNA (753bp) protein (251aa)
ABC-2 family transporter protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UCZ6_9FIRM
ABC-2 family transporter protein {ECO:0000313|EMBL:ERT57220.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
hypothetical protein
L3_108_000G1_scaffold_793_16
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19910..20044
DNA (135bp) protein (45aa)
ABC-2 family transporter protein n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7V356_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFM25136.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
hypothetical protein
L3_108_000G1_scaffold_793_17
unknown

Not on your lists

comp(20243..20584)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_108_000G1_scaffold_793_18
unknown

Not on your lists

21110..22177
DNA (1068bp) protein (356aa)

This feature has no annotations

L3_108_000G1_scaffold_793_19
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22518..22904
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AT44_EUBCE
signal peptidase I
Tax=BJP_IG2157_Clostridiales_52_13
L3_108_000G1_scaffold_793_20
unknown

Not on your lists

comp(23367..23606)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_108_000G1_scaffold_793_21
Shuttleworthia satelles, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23770..24846)
DNA (1077bp) protein (359aa)
Fic family protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GE23_9FIRM
Fic family protein {ECO:0000313|EMBL:EEP27275.1}; TaxID=626523 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia satelles DSM 14600.;"
Protein involved in cell division
L3_108_000G1_scaffold_793_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24843..25058)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YMS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13223.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_108_000G1_scaffold_793_23
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25148..25774)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XTT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70974.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L3_108_000G1_scaffold_793_24
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25771..26097)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0Y4V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70975.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L3_108_000G1_scaffold_793_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26143..26295)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XDD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13225.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_108_000G1_scaffold_793_26
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26285..27427)
DNA (1143bp) protein (381aa)
Cysteine desulfurase (EC:2.8.1.7)
Putative cysteine desulfurase n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UK88_9FIRM
Putative cysteine desulfurase {ECO:0000313|EMBL:ERL25319.1}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
L3_108_000G1_scaffold_793_27
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27436..27633)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00610.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L3_108_000G1_scaffold_793_28
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27623..29080)
DNA (1458bp) protein (486aa)
TIGR02688 family protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK92_9FIRM
TIGR02688 family protein {ECO:0000313|EMBL:EFV00611.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
ATP-dependent Lon-type protease-like protein
L3_108_000G1_scaffold_793_29
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29093..31393)
DNA (2301bp) protein (767aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00612.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L3_108_000G1_scaffold_793_30
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31404..35609)
DNA (4206bp) protein (1402aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00613.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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