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L3_108_000G1_scaffold_4466

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_4466_1
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(158..907)
DNA (750bp) protein (250aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
tRNA (guanine-N1)-methyltransferase n=1 Tax=Paenibacillus fonticola RepID=UPI0003675050
tRNA (guanine-N1)-methyltransferase
L3_108_000G1_scaffold_4466_2
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(910..1425)
DNA (516bp) protein (172aa)
Ribosome maturation factor RimM n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FRL4_DESHD
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
L3_108_000G1_scaffold_4466_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1418..1840)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FVZ3_DESHD
Uncharacterized protein {ECO:0000313|EMBL:KJS18927.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
L3_108_000G1_scaffold_4466_4
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1895..2125)
DNA (231bp) protein (77aa)
UPF0109 protein Adeg_1415 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R887_AMMDK
hypothetical protein
UPF0109 protein Adeg_1415 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
L3_108_000G1_scaffold_4466_5
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2138..2389)
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=1 Tax=Caloramator australicus RC3 RepID=G0V3Z5_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
rpsP; 30S ribosomal protein S16
L3_108_000G1_scaffold_4466_6
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2413..3759)
DNA (1347bp) protein (449aa)
signal recognition particle protein Srp54 n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225AD2B
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ffh; signal recognition particle GTPase
L3_108_000G1_scaffold_4466_7
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3749..4129)
DNA (381bp) protein (127aa)
UPF0122 protein I532_01830 n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E4U5_9BACL
UPF0122 protein I532_01830 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
hypothetical protein
L3_108_000G1_scaffold_4466_8
Clostridium sp. CAG:307, Tenericutes, Bacteria

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comp(4166..4684)
DNA (519bp) protein (173aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=1 Tax=Clostridium sp. CAG:307 RepID=R7GHP2_9CLOT
DUTP diphosphatase {ECO:0000313|EMBL:CDE25497.1}; TaxID=1262795 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
L3_108_000G1_scaffold_4466_9
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4776..5489
DNA (714bp) protein (238aa)
Probable transcriptional regulatory protein HMPREF0389_00396 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GS40_FILAD
glucose-1-phosphate adenylyltransferase
Probable transcriptional regulatory protein HMPREF0389_00396 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L3_108_000G1_scaffold_4466_10
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5547..6587)
DNA (1041bp) protein (347aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIP3_MOOTA
4Fe-4S ferredoxin
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
L3_108_000G1_scaffold_4466_11
RLO_PLX_64_10, Bacteria

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comp(6584..7294)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003746C38
sensory transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
L3_108_000G1_scaffold_4466_12
unknown

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comp(7287..7721)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_108_000G1_scaffold_4466_13
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7732..8193)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Turicibacter RepID=D4W650_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF63637.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
hypothetical protein
L3_108_000G1_scaffold_4466_14
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8190..8984)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W651_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF63638.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
hypothetical protein
L3_108_000G1_scaffold_4466_15
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8977..9438)
DNA (462bp) protein (154aa)
CBS domain containing protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1A6_DESAP
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACA58825.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
L3_108_000G1_scaffold_4466_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9477..10067)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00035E3F31
Uncharacterized protein {ECO:0000313|EMBL:KJS19147.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
LysR family transcriptional regulator
Displaying 16 items

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