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L3_108_000G1_scaffold_2919

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_2919_1
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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167..1099
DNA (933bp) protein (311aa)
Xylose operon regulator n=3 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY8_LACLM
xylR; xylose operon regulator
Xylose operon regulator {ECO:0000313|EMBL:CAL97595.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_2919_2
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1255..2361)
DNA (1107bp) protein (369aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY7_LACLM
L3_108_000G1_scaffold_2919_3
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2417..2902)
DNA (486bp) protein (162aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=272622 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain SK11).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=4 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY6_LACLM
L3_108_000G1_scaffold_2919_4
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2899..3591)
DNA (693bp) protein (231aa)
Putative hydrolase n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY5_LACLM
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:CAL97592.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_2919_5
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3663..4904)
DNA (1242bp) protein (414aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1415168 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris GE214.;"
Phosphoribosylamine--glycine ligase n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY4_LACLM
L3_108_000G1_scaffold_2919_6
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5298..5924
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=4 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY3_LACLM
TetR family transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AEU40181.1}; TaxID=1104322 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris A76.;"
L3_108_000G1_scaffold_2919_7
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6028..7425
DNA (1398bp) protein (466aa)
MFS transporter n=1 Tax=Lactococcus lactis subsp. cremoris KW2 RepID=T2F6U4_LACLC
MFS transporter
MFS transporter {ECO:0000313|EMBL:AGV73426.1}; TaxID=1295826 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris KW2.;"
L3_108_000G1_scaffold_2919_8
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7463..8188)
DNA (726bp) protein (242aa)
Hydrolase, haloacid dehalogenase-like family protein n=8 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJY1_LACLM
hydrolase
Hydrolase, haloacid dehalogenase-like family protein {ECO:0000313|EMBL:CAL97588.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_2919_9
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8274..9830)
DNA (1557bp) protein (519aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH {ECO:0000255|HAMAP-Rule:MF_00139}; Includes:; Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000255|HAMAP-Rule:MF_00139}; EC=2.1.2.3 {ECO:0000255|HAMAP-Rule:MF_00139};; AICAR transformylase {ECO:0000255|HAMAP-Rule:MF_00139}; Includes:; IMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_00139}; EC=3.5.4.10 {ECO:0000255|HAMAP-Rule:MF_00139};; ATIC {ECO:0000255|HAMAP-Rule:MF_00139}; IMP synthase {ECO:0000255|HAMAP-Rule:MF_00139}; Inosinicase {ECO:0000255|HAMAP-Rule:MF_00139}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
Bifunctional purine biosynthesis protein PurH n=2 Tax=Lactococcus lactis subsp. cremoris RepID=PUR9_LACLM
L3_108_000G1_scaffold_2919_10
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10007..10549)
DNA (543bp) protein (181aa)
hprT; HprT protein (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ABJ73107.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ABJ73107.1};; TaxID=272622 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain SK11).;"
HprT protein n=9 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJX9_LACLM
L3_108_000G1_scaffold_2919_11
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10684..11721)
DNA (1038bp) protein (346aa)
Putative nucleoside-diphosphate-sugar epimerases n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJX8_LACLM
putative nucleoside-diphosphate-sugar epimerase
Putative nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CAL97585.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_2919_12
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11849..12379
DNA (531bp) protein (177aa)
Transcriptional regulator, AcrR family n=3 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJX7_LACLM
AcrR family transcriptional regulator
Transcriptional regulator, AcrR family {ECO:0000313|EMBL:CAL97584.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_2919_13
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(12431..14071)
DNA (1641bp) protein (547aa)
ABC transporter ATP binding and permease protein n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJX6_LACLM
ABC transporter ATP binding and permease protein {ECO:0000313|EMBL:CAL97582.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
ABC transporter ATP binding and permease
L3_108_000G1_scaffold_2919_14
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(14211..14759)
DNA (549bp) protein (183aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1234873 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris TIFN3.;"
Phosphoribosylglycinamide formyltransferase n=9 Tax=Lactococcus lactis subsp. cremoris RepID=A2RJX5_LACLM
L3_108_000G1_scaffold_2919_15
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14788..15804)
DNA (1017bp) protein (339aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1295827 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris HP.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=4 Tax=Lactococcus lactis subsp. cremoris RepID=D8KHU7_LACLN
Displaying 15 items

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