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L3_108_000G1_scaffold_4888

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_4888_1
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(219..662)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Lactococcus lactis subsp. cremoris KW2 RepID=T2F4Z7_LACLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGV72953.1}; TaxID=1295826 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris KW2.;"
L3_108_000G1_scaffold_4888_2
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(820..1725)
DNA (906bp) protein (302aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1295826 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris KW2.;"
Pseudouridine synthase n=1 Tax=Lactococcus lactis subsp. cremoris KW2 RepID=T2F634_LACLC
pseudouridine synthase RluA family
L3_108_000G1_scaffold_4888_3
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1788..2240)
DNA (453bp) protein (151aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1415168 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris GE214.;"
Lipoprotein signal peptidase n=2 Tax=Lactococcus lactis subsp. cremoris RepID=LSPA_LACLM
L3_108_000G1_scaffold_4888_4
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2529..2909)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLD5_LACLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY62787.1}; TaxID=1415168 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris GE214.;"
L3_108_000G1_scaffold_4888_5
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3039..3407
DNA (369bp) protein (123aa)
Putative transcription regulator n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLD6_LACLM
putative transcriptional regulator
Putative transcription regulator {ECO:0000313|EMBL:CAL98103.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_4888_6
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3596..3913
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Lactococcus lactis subsp. cremoris (strain NZ9000) RepID=D8KJB9_LACLN
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:KEY62788.1}; TaxID=1415168 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris GE214.;"
L3_108_000G1_scaffold_4888_7
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4009..4485)
DNA (477bp) protein (159aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1359 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (Streptococcus cremoris).;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=6 Tax=Lactococcus lactis subsp. cremoris RepID=Q02ZL1_LACLS
L3_108_000G1_scaffold_4888_8
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4500..5696)
DNA (1197bp) protein (399aa)
ribA; riboflavin biosynthesis protein ribA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=3 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLD9_LACLM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_4888_9
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5708..6355)
DNA (648bp) protein (216aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
RibB protein n=3 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLE0_LACLM
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:KEY62791.1}; TaxID=1415168 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris GE214.;"
L3_108_000G1_scaffold_4888_10
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6355..7443)
DNA (1089bp) protein (363aa)
Riboflavin biosynthesis protein RibD n=3 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLE1_LACLM
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769, ECO:0000313|EMBL:CAL98108.1}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
L3_108_000G1_scaffold_4888_11
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7935..8840
DNA (906bp) protein (302aa)
Magnesium and cobalt transport protein n=4 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLE2_LACLM
magnesium and cobalt transport protein
Magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:AEU40703.1}; TaxID=1104322 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris A76.;"
L3_108_000G1_scaffold_4888_12
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8866..9096)
DNA (231bp) protein (77aa)
DNA topoisomerase IV subunit A (EC:5.99.1.-)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00937};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; TaxID=416870 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris (strain MG1363).;"
DNA topoisomerase 4 subunit A n=2 Tax=Lactococcus lactis subsp. cremoris RepID=A2RLE3_LACLM
Displaying 12 items

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