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L3_108_000G1_scaffold_1606

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_1606_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(560..1648)
DNA (1089bp) protein (363aa)
FRG domain protein n=1 Tax=Clostridium difficile DA00246 RepID=T3WY30_CLODI
FRG domain-containing protein {ECO:0000313|EMBL:CEO08521.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
FRG domain protein
L3_108_000G1_scaffold_1606_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1710..1922)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XDV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY94073.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_108_000G1_scaffold_1606_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2326..3624)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LJR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05188.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
integrase catalytic subunit
L3_108_000G1_scaffold_1606_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4139..5455)
DNA (1317bp) protein (439aa)
ATP-dependent DNA helicase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ01_9PROT
ATP-dependent DNA helicase {ECO:0000313|EMBL:CAM75858.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
transcriptional regulator
L3_108_000G1_scaffold_1606_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5746..7287)
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
GMP synthase large subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K882_9FIRM
L3_108_000G1_scaffold_1606_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7506..8846)
DNA (1341bp) protein (447aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K883_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EGN41261.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
MATE efflux family protein
L3_108_000G1_scaffold_1606_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8923..9189)
DNA (267bp) protein (89aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K884_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EGN41262.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Stage III sporulation protein D.
L3_108_000G1_scaffold_1606_8
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(9284..10219)
DNA (936bp) protein (312aa)
Phosphodiesterase, family subfamily id=4182925 bin=GWF2_Clostridiales_38_85 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
serine/threonine protein phosphatase
Tax=GWF2_Clostridiales_38_85_curated
L3_108_000G1_scaffold_1606_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10216..10617)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K886_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41264.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_1606_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10575..11960)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41265.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_1606_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11961..13889)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41265.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ATPase AAA
L3_108_000G1_scaffold_1606_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13990..14709)
DNA (720bp) protein (240aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=N9X7Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23474.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_108_000G1_scaffold_1606_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14999..18928)
DNA (3930bp) protein (1310aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K893_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EGN41271.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
signal transduction histidine kinase
L3_108_000G1_scaffold_1606_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18925..20403)
DNA (1479bp) protein (493aa)
sn-glycerol 3-phosphate transport system substrate-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K894_9FIRM
sn-glycerol 3-phosphate transport system substrate-binding protein {ECO:0000313|EMBL:EGN41272.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
lipoprotein
L3_108_000G1_scaffold_1606_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20608..22470
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K895_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41273.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase family protein
L3_108_000G1_scaffold_1606_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22485..23078)
DNA (594bp) protein (198aa)
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K896_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EGN41274.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_1606_17
unknown

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23311..23493
DNA (183bp) protein (61aa)

This feature has no annotations

L3_108_000G1_scaffold_1606_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23618..25351
DNA (1734bp) protein (578aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K897_9FIRM
L3_108_000G1_scaffold_1606_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25371..27095)
DNA (1725bp) protein (575aa)
Myosin-crossreactive antigen n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K898_9FIRM
Myosin-crossreactive antigen {ECO:0000313|EMBL:EGN41276.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
myosin-cross-reactive antigen
L3_108_000G1_scaffold_1606_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27415..27651
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41277.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_1606_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27835..28155)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41278.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
Displaying 21 items

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