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L3_108_000G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 347 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_5_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..811)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TZU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ62362.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sugar ABC transporter permease
L3_108_000G1_scaffold_5_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(882..2273)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59097.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
extracellular solute-binding protein
L3_108_000G1_scaffold_5_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2295..3197)
DNA (903bp) protein (301aa)
AP endonuclease, family 2 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AN19_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:ERI67209.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
xylose isomerase
L3_108_000G1_scaffold_5_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3211..4464)
DNA (1254bp) protein (418aa)
MOFRL family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B629_9CLOT
MOFRL family protein {ECO:0000313|EMBL:ERI67208.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
D-isomer specific 2-hydroxyacid dehydrogenase
L3_108_000G1_scaffold_5_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4666..5793)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CD93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67207.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CdaR family transcriptional regulator
L3_108_000G1_scaffold_5_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6296..6856
DNA (561bp) protein (187aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIS5_9CLOT
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:ERI67206.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
probable proton-coupled thiamine transporter YuaJ
L3_108_000G1_scaffold_5_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7005..7886)
DNA (882bp) protein (294aa)
Aldose 1-epimerase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4R9_9CLOT
Aldose 1-epimerase {ECO:0000313|EMBL:ERI67205.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Galactose mutarotase and related enzymes
L3_108_000G1_scaffold_5_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7979..8806)
DNA (828bp) protein (276aa)
Cobalt/nickel transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEU8_9FIRM
Cobalt/nickel transport system permease {ECO:0000313|EMBL:EGN35691.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative cobalt ABC transporter permease
L3_108_000G1_scaffold_5_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8799..10508)
DNA (1710bp) protein (570aa)
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KF87_9FIRM
Cobalt/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EGN35692.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter
L3_108_000G1_scaffold_5_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10751..11305)
DNA (555bp) protein (185aa)
UPF0397 protein HMPREF0994_04383 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEU9_9FIRM
UPF0397 protein HMPREF0994_04383 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_5_11
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11672..12946)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae bacterium A4 RepID=R9IPC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23686.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
transposase IS4 family protein
L3_108_000G1_scaffold_5_12
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12963..13280)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037B5827
Uncharacterized protein {ECO:0000313|EMBL:EOS22543.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_108_000G1_scaffold_5_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13458..15974)
DNA (2517bp) protein (839aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WQC8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99857.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_108_000G1_scaffold_5_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16157..19780)
DNA (3624bp) protein (1208aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LJX0_9FIRM
recombination helicase AddA, Firmicutes type
L3_108_000G1_scaffold_5_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19740..23216)
DNA (3477bp) protein (1159aa)
Helicase-exonuclease AddAB, AddB subunit n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEW2_9FIRM
Helicase-exonuclease AddAB, AddB subunit {ECO:0000313|EMBL:EGN35708.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
addB; ATP-dependent nuclease subunit B AddB
L3_108_000G1_scaffold_5_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23569..25875
DNA (2307bp) protein (769aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CD83_9CLOT
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:ERI67197.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_108_000G1_scaffold_5_17
unknown

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25901..26410
DNA (510bp) protein (170aa)

This feature has no annotations

L3_108_000G1_scaffold_5_18
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26281..27030)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IFF8_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHV95694.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
L3_108_000G1_scaffold_5_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27035..27868)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00035F0FB3
Uncharacterized protein {ECO:0000313|EMBL:EHI57415.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
CUT1 family carbohydrate ABC transporter membrane protein 2
L3_108_000G1_scaffold_5_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27873..28739)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003768B89
ABC transporter, permease protein {ECO:0000313|EMBL:EGB92795.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sugar ABC transporter permease
L3_108_000G1_scaffold_5_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28766..30100)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI000363C2DC
Uncharacterized protein {ECO:0000313|EMBL:EHI57417.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter substrate-binding protein
L3_108_000G1_scaffold_5_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30346..32184)
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00035CE61A
Uncharacterized protein {ECO:0000313|EMBL:EHI57418.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
integral membrane sensor signal transduction histidine kinase
L3_108_000G1_scaffold_5_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32374..33921
DNA (1548bp) protein (516aa)
Two-component response regulator id=4091053 bin=GWC2_Clostridiales_40_7 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Uncharacterized protein {ECO:0000313|EMBL:EHI57419.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_108_000G1_scaffold_5_24
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(33977..35200)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LIA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87208.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
fucose permease
L3_108_000G1_scaffold_5_25
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(35203..36240)
DNA (1038bp) protein (346aa)
Oxidoreductase domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCD7_HALXS
oxidoreductase domain-containing protein
Tax=CG_Arma_01
L3_108_000G1_scaffold_5_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36372..38990)
DNA (2619bp) protein (873aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEW8_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EGN35714.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
cation transporting ATPase-like protein
L3_108_000G1_scaffold_5_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38992..39585)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35715.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator (TetR-like)
L3_108_000G1_scaffold_5_28
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39937..40170)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67190.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_108_000G1_scaffold_5_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40326..40640
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35717.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
XRE family transcriptional regulator
L3_108_000G1_scaffold_5_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40748..43546)
DNA (2799bp) protein (933aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEX2_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EGN35718.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
calcium-translocating P-type ATPase, PMCA-type
Displaying items 1-30 of 347 in total

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