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L3_108_000G1_scaffold_56

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Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_56_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1021
DNA (1020bp) protein (340aa)
Virulence protein n=6 Tax=Firmicutes RepID=D4JZW0_9FIRM
Virulence protein
Uncharacterized protein {ECO:0000313|EMBL:EGN41098.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_56_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1081..1455)
DNA (375bp) protein (125aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=F7K8K2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ19992.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_108_000G1_scaffold_56_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1527..1706)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BB83_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99557.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_108_000G1_scaffold_56_4
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1807..1989)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS71468.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
L3_108_000G1_scaffold_56_5
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2047..2502)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FI13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS71485.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L3_108_000G1_scaffold_56_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3003..3857)
DNA (855bp) protein (285aa)
Transcriptional regulator LysR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q627_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCZ24215.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
LysR family transcriptional regulator
L3_108_000G1_scaffold_56_7
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

4031..4882
DNA (852bp) protein (284aa)
aldehyde reductase (EC:1.1.1.21)
Methylglyoxal reductase (NADPH-dependent) n=1 Tax=Clostridium sp. CAG:967 RepID=R5KRL7_9CLOT
Methylglyoxal reductase (NADPH-dependent) {ECO:0000313|EMBL:CCY63751.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_108_000G1_scaffold_56_8
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4898..5641
DNA (744bp) protein (248aa)
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Ruminococcus albus 8 RepID=E9S8S5_RUMAL
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EGC04312.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L3_108_000G1_scaffold_56_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5638..6048
DNA (411bp) protein (137aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ86_9CLOT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EHI97659.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L3_108_000G1_scaffold_56_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6071..7261
DNA (1191bp) protein (397aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EHI97596.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EHI97596.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Iron-containing alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXS9_9CLOT
L3_108_000G1_scaffold_56_11
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7277..7810
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y9C8_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43320.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
multimeric flavodoxin WrbA
L3_108_000G1_scaffold_56_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7843..8613
DNA (771bp) protein (257aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXT3_9CLOT
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:EHI97600.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_108_000G1_scaffold_56_13
Scardovia wiggsiae, Scardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8627..9385
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Scardovia wiggsiae RepID=J0DEG3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EJD64673.1}; TaxID=857290 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Scardovia.;" source="Scardovia wiggsiae F0424.;"
putative flavodoxin
L3_108_000G1_scaffold_56_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9407..9604
DNA (198bp) protein (66aa)
Flavin reductase {ECO:0000313|EMBL:EDP20284.1}; EC=1.7.-.- {ECO:0000313|EMBL:EDP20284.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Flavin reductase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGI7_9FIRM
Multimeric flavodoxin WrbA
L3_108_000G1_scaffold_56_15
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9601..9939
DNA (339bp) protein (113aa)
Flavin reductase {ECO:0000313|EMBL:EFE14184.1}; EC=1.7.-.- {ECO:0000313|EMBL:EFE14184.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Flavin reductase n=1 Tax=Clostridium sp. M62/1 RepID=D4C6J6_9CLOT
Multimeric flavodoxin WrbA
L3_108_000G1_scaffold_56_16
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9958..10710
DNA (753bp) protein (251aa)
Putative flavodoxin n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE0_9CLOT
Putative flavodoxin {ECO:0000313|EMBL:EEG31580.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_108_000G1_scaffold_56_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10737..11381
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61094.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_108_000G1_scaffold_56_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11524..12195
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ITD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25123.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_108_000G1_scaffold_56_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12192..13226
DNA (1035bp) protein (345aa)
ApbE family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE2_9CLOT
ApbE family protein {ECO:0000313|EMBL:EEG31582.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ApbE family lipoprotein
L3_108_000G1_scaffold_56_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13257..13937
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PI93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24776.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_000G1_scaffold_56_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13982..14332)
DNA (351bp) protein (117aa)
Uncharacterized protein n=4 Tax=Clostridium botulinum RepID=A5HZH6_CLOBH
Uncharacterized protein {ECO:0000313|EMBL:BAQ12709.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L3_108_000G1_scaffold_56_22
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14488..14883)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=UPI0003B73668
Uncharacterized protein {ECO:0000313|EMBL:EOS31234.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Predicted membrane protein
L3_108_000G1_scaffold_56_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15011..16321
DNA (1311bp) protein (437aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
FolC protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2U1_9FIRM
FolC protein {ECO:0000313|EMBL:EGN41766.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_56_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16311..16868
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2U0_9FIRM
L3_108_000G1_scaffold_56_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16895..17377
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41764.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
metal dependent phosphohydrolase
L3_108_000G1_scaffold_56_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17436..18245
DNA (810bp) protein (270aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2T8_9FIRM
L3_108_000G1_scaffold_56_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18335..19195
DNA (861bp) protein (287aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2T7_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EGN41762.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_56_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19198..20322
DNA (1125bp) protein (375aa)
pheA; chorismate mutase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2T6_9FIRM
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:EGN41761.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_56_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20365..21720
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41760.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Predicted ATPase (AAA+ superfamily)
L3_108_000G1_scaffold_56_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21698..23278
DNA (1581bp) protein (527aa)
ppx; exopolyphosphatase (EC:3.6.1.11)
Exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2T4_9FIRM
Exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase {ECO:0000313|EMBL:EGN41759.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Displaying items 1-30 of 170 in total

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