ggKbase home page

L3_108_000G1_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_96_1
unknown

Not on your lists

306..533
DNA (228bp) protein (76aa)

This feature has no annotations

L3_108_000G1_scaffold_96_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

684..1304
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AWK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56283.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_108_000G1_scaffold_96_3
unknown

Not on your lists

1782..2354
DNA (573bp) protein (191aa)

This feature has no annotations

L3_108_000G1_scaffold_96_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2888..6055
DNA (3168bp) protein (1056aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7Q2_9FIRM
L3_108_000G1_scaffold_96_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6284..8785
DNA (2502bp) protein (834aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7Q1_9FIRM
L3_108_000G1_scaffold_96_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9099..9956)
DNA (858bp) protein (286aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CFU3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66191.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sugar ABC transporter permease
L3_108_000G1_scaffold_96_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9966..10934)
DNA (969bp) protein (323aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B1Y5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66190.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative binding-protein-dependent transport systems inner membrane component
L3_108_000G1_scaffold_96_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11023..12363)
DNA (1341bp) protein (447aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AK44_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI66189.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative family 1 extracellular solute-binding protein
L3_108_000G1_scaffold_96_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12621..14396
DNA (1776bp) protein (592aa)
HAMP domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B376_9CLOT
HAMP domain protein {ECO:0000313|EMBL:ERI66188.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
integral membrane sensor signal transduction histidine kinase
L3_108_000G1_scaffold_96_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14371..15894
DNA (1524bp) protein (508aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CAB9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI66187.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_108_000G1_scaffold_96_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15964..18930)
DNA (2967bp) protein (989aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CFS8_9CLOT
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:ERI66186.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
secreted protein
L3_108_000G1_scaffold_96_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19079..20128
DNA (1050bp) protein (350aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B1S9_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI66185.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_108_000G1_scaffold_96_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20386..21144
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CN72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68751.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_108_000G1_scaffold_96_14
unknown

Not on your lists

21208..21489
DNA (282bp) protein (94aa)

This feature has no annotations

L3_108_000G1_scaffold_96_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21464..22267
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41347.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
two-component response regulator YesN
L3_108_000G1_scaffold_96_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22251..24044
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41346.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
histidine kinase
L3_108_000G1_scaffold_96_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24394..25386
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LA53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05141.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport systems inner membrane component
L3_108_000G1_scaffold_96_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25402..26220
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41343.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport systems inner membrane component
L3_108_000G1_scaffold_96_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26322..27827
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41342.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
family 1 extracellular solute-binding protein
L3_108_000G1_scaffold_96_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27930..29393
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41341.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sulfatase
L3_108_000G1_scaffold_96_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29437..30744
DNA (1308bp) protein (436aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase {ECO:0000313|EMBL:ABX42556.1}; EC=3.2.1.51 {ECO:0000313|EMBL:ABX42556.1};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Alpha-L-fucosidase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJE4_CLOPH
L3_108_000G1_scaffold_96_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30805..31257)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q252F5_DESHY
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EXG87564.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_108_000G1_scaffold_96_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31331..32581)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41340.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Glycerol dehydrogenase and related enzymes
L3_108_000G1_scaffold_96_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33064..33840
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41339.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DeoR family transcriptional regulator
L3_108_000G1_scaffold_96_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33893..35245
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7N9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EGN41338.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
MATE efflux family protein
L3_108_000G1_scaffold_96_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35250..35864
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41349.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_96_27
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35926..36270
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1J7_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=BJP_IG2157_Clostridiales_52_13
L3_108_000G1_scaffold_96_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36246..36590
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38643.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_96_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36804..37004
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41337.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA-binding protein
L3_108_000G1_scaffold_96_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37121..37867
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41336.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Protein of unknown function (DUF3169).
Displaying items 1-30 of 149 in total

View Taxonomy