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L3_108_000G1_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_289_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..951)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37714.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_289_2
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1556..1996)
DNA (441bp) protein (147aa)
Endo-beta-mannanase-like protein n=2 Tax=Paenibacillus mucilaginosus RepID=H6NCQ1_9BACL
endo-beta-mannanase
Endo-beta-mannanase {ECO:0000313|EMBL:AFH61205.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
L3_108_000G1_scaffold_289_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1977..3116)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40121.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar kinase
L3_108_000G1_scaffold_289_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3142..3930)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D050_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55292.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Domain of unknown function (DUF303).
L3_108_000G1_scaffold_289_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4091..4456)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59947.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_108_000G1_scaffold_289_6
unknown

Not on your lists

comp(4634..5344)
DNA (711bp) protein (237aa)

This feature has no annotations

L3_108_000G1_scaffold_289_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5606..6358
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38853.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter ATP-binding protein
L3_108_000G1_scaffold_289_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6345..8438
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38854.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type transport system, permease
L3_108_000G1_scaffold_289_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8469..8786
DNA (318bp) protein (106aa)
Collagen triple helix repeat protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXL7_9CLOT
Collagen triple helix repeat protein {ECO:0000313|EMBL:EEG56176.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_108_000G1_scaffold_289_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8918..9238)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38855.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_289_11
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9394..10851)
DNA (1458bp) protein (486aa)
Glycosyl hydrolase family 32 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSR6_9FIRM
Glycoside hydrolase {ECO:0000313|EMBL:KHL97434.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
glycoside hydrolase
L3_108_000G1_scaffold_289_12
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10878..12302)
DNA (1425bp) protein (475aa)
ABC transporter solute-binding protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N2D9_9CLOT
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDC05210.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
family 1 extracellular solute-binding protein
L3_108_000G1_scaffold_289_13
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12610..13497
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VTF9_9CLOT
Sugar ABC transporter permease {ECO:0000313|EMBL:AKG37967.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
binding-protein-dependent transport systems inner membrane component
L3_108_000G1_scaffold_289_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13494..14321
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VTG0_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC05215.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_108_000G1_scaffold_289_15
Paenibacillus sp. FSL R5-0912, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14358..16097
DNA (1740bp) protein (580aa)
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1LRH4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ43142.1}; TaxID=1536771 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0912.;"
L3_108_000G1_scaffold_289_16
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16114..17607
DNA (1494bp) protein (498aa)
Response regulator receiver domain protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M2X2_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ31840.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
L3_108_000G1_scaffold_289_17
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17643..18248)
DNA (606bp) protein (202aa)
xylosidase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B6970B
Beta-xylosidase {ECO:0000313|EMBL:KIA84823.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
glycoside hydrolase
L3_108_000G1_scaffold_289_18
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18809..19228)
DNA (420bp) protein (140aa)
Uncharacterized protein n=3 Tax=Treponema denticola RepID=M2CAX8_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB45851.1}; TaxID=999426 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola AL-2.;"
PilT
L3_108_000G1_scaffold_289_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19212..19469)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39041.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_289_20
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19644..20909
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KEB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44779.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
transposase
L3_108_000G1_scaffold_289_21
unknown

Not on your lists

comp(20887..21147)
DNA (261bp) protein (87aa)

This feature has no annotations

L3_108_000G1_scaffold_289_22
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

21405..22118
DNA (714bp) protein (238aa)
Transposase IS4 family protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UMG2_CYAP2
Uncharacterized protein {ECO:0000313|EMBL:KKW29289.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWD2_52_7.;"
transposase IS4 family protein
L3_108_000G1_scaffold_289_23
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(22077..23492)
DNA (1416bp) protein (472aa)
Putative ATPase (AAA+ superfamily) protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCH1_9EURY
putative ATPase (AAA+ superfamily) protein
Putative ATPase (AAA+ superfamily) protein {ECO:0000313|EMBL:AGN27143.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
L3_108_000G1_scaffold_289_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23612..24469)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38857.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
NmrA family protein
L3_108_000G1_scaffold_289_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24462..24899)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38858.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_289_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25101..25535)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38859.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_289_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25591..25899
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KIE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32336.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_289_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25912..26808
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KIE7_9FIRM
hypothetical protein
L3_108_000G1_scaffold_289_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26844..27281)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B345_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72574.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_108_000G1_scaffold_289_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27444..29873)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35710.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyl hydrolase
Displaying items 1-30 of 90 in total

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