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L3_108_000G1_scaffold_296

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_296_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(236..448)
DNA (213bp) protein (71aa)
Putative cold shock protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBL3_9CLOT
Putative cold shock protein {ECO:0000313|EMBL:ERI69590.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
cold-shock DNA-binding domain-containing protein
L3_108_000G1_scaffold_296_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(736..1245)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32877.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
CarD family transcriptional regulator
L3_108_000G1_scaffold_296_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1451..4147)
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KSA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05177.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative permease
L3_108_000G1_scaffold_296_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4144..4845)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGN32881.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter ATP-binding protein
L3_108_000G1_scaffold_296_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4975..6153)
DNA (1179bp) protein (393aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV2_9FIRM
hypothetical protein
L3_108_000G1_scaffold_296_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6143..6835)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32883.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_296_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6880..8124)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32884.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_296_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8308..9135
DNA (828bp) protein (276aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV5_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EGN32885.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
fimbrial protein
L3_108_000G1_scaffold_296_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9215..10528)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32886.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_296_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10871..11740)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32887.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
NAD-dependent epimerase/dehydratase
L3_108_000G1_scaffold_296_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11935..12561)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32888.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_296_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12681..13601)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32889.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
aldo/keto reductase
L3_108_000G1_scaffold_296_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14131..14637)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32890.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_296_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14634..15155)
DNA (522bp) protein (174aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW1_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGN32891.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
RNA polymerase subunit sigma
L3_108_000G1_scaffold_296_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15382..16482)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KI40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32892.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_296_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16463..19483)
DNA (3021bp) protein (1007aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32893.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Cation/multidrug efflux pump
L3_108_000G1_scaffold_296_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19480..21729)
DNA (2250bp) protein (750aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KI41_9FIRM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EGN32894.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
RND family efflux transporter, MFP subunit
L3_108_000G1_scaffold_296_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21921..22475
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32895.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Transcriptional regulators
L3_108_000G1_scaffold_296_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22448..23569)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32896.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
L3_108_000G1_scaffold_296_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23566..24240)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32897.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_000G1_scaffold_296_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24254..26728)
DNA (2475bp) protein (825aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32898.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_296_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26721..27401)
DNA (681bp) protein (227aa)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW7_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGN32899.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter ATP-binding protein
L3_108_000G1_scaffold_296_23
unknown

Not on your lists

comp(27716..27892)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_108_000G1_scaffold_296_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27929..28399)
DNA (471bp) protein (157aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CRD1_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ERI69871.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
MerR family transcriptional regulator
L3_108_000G1_scaffold_296_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28392..29363)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CKV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69872.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_108_000G1_scaffold_296_26
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29353..29991)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JFZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33135.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
putative ABC transporter permease/ATP-binding protein
L3_108_000G1_scaffold_296_27
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29972..30940)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JFX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33134.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ABC transporter-like protein
L3_108_000G1_scaffold_296_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31056..33800)
DNA (2745bp) protein (915aa)
mgtA; Mg(2+) transport ATPase (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J763_9FIRM
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:CDB46162.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_108_000G1_scaffold_296_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34478..35416)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32900.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Putative transposase, YhgA-like.
L3_108_000G1_scaffold_296_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36024..36557)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32906.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Predicted membrane protein
Displaying items 1-30 of 97 in total

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