ggKbase home page

L3_108_000G1_scaffold_644

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_644_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

191..463
DNA (273bp) protein (91aa)
DNA-binding protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002E710F4
Uncharacterized protein {ECO:0000313|EMBL:ENY92099.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
KilA, N-terminal/APSES-type HTH, DNA-binding protein
L3_108_000G1_scaffold_644_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

511..2916
DNA (2406bp) protein (802aa)
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AQG2_9CLOT
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:ERI68079.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CRISPR-associated helicase, Cas3 family
L3_108_000G1_scaffold_644_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2937..3680
DNA (744bp) protein (248aa)
CRISPR-associated protein Cas5, Dvulg subtype n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B8E0_9CLOT
CRISPR-associated protein Cas5, Dvulg subtype {ECO:0000313|EMBL:ERI68078.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CRISPR-associated protein Cas5, subtype I-C/DVULG
L3_108_000G1_scaffold_644_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3677..5704
DNA (2028bp) protein (676aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CL86_9CLOT
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ERI68076.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CRISPR-associated protein, Csd1 family
L3_108_000G1_scaffold_644_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5705..6610
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B767_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68075.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
CRISPR-associated protein Csd2 family
L3_108_000G1_scaffold_644_6
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6851..7144
DNA (294bp) protein (98aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRN7_FILAD
toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EFE28328.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L3_108_000G1_scaffold_644_7
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7141..7422
DNA (282bp) protein (94aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRN6_FILAD
toxin-antitoxin system, toxin component, RelE family
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFE28327.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L3_108_000G1_scaffold_644_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8337..9182)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41634.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative MerR family transcriptional regulator
L3_108_000G1_scaffold_644_9
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9282..9701)
DNA (420bp) protein (140aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRU1_CLOPH
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABX43585.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_108_000G1_scaffold_644_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9749..10285)
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIV8_CLOBU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:KJZ87386.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative acetyltransferase, gnat family
L3_108_000G1_scaffold_644_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10344..12557)
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41636.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter-like protein
L3_108_000G1_scaffold_644_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12750..13307)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41637.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_644_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13317..15686)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41638.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter permease/ATP-binding protein
L3_108_000G1_scaffold_644_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16131..16985)
DNA (855bp) protein (285aa)
Aminoglycoside 6-adenylyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7K2_9FIRM
Aminoglycoside 6-adenylyltransferase {ECO:0000313|EMBL:EGN41644.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
aadK; aminoglycoside 6-adenylyltransferase
L3_108_000G1_scaffold_644_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17293..18159
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41645.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
MerR family transcriptional regulator
L3_108_000G1_scaffold_644_16
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18064..18411)
DNA (348bp) protein (116aa)
RelE/StbE family addiction module toxin n=1 Tax=Clostridium sp. ASF502 RepID=N2B147_9CLOT
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EMZ32120.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
RelE family toxin-antitoxin system toxin protein
L3_108_000G1_scaffold_644_17
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18408..18683)
DNA (276bp) protein (92aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2K6_9FIRM
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EOS40456.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein
L3_108_000G1_scaffold_644_18
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18912..19241)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PA58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86768.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
putative acetyltransferase, gnat family
L3_108_000G1_scaffold_644_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19247..19837)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41647.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
kinase
L3_108_000G1_scaffold_644_20
unknown

Not on your lists

comp(19843..19986)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_108_000G1_scaffold_644_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19967..20905)
DNA (939bp) protein (313aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CSW5_9CLOT
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERI70426.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
alpha/beta hydrolase
L3_108_000G1_scaffold_644_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20983..21945)
DNA (963bp) protein (321aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Putative glycerate dehydrogenase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4S5_9CLOT
Putative glycerate dehydrogenase {ECO:0000313|EMBL:ERI67210.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_108_000G1_scaffold_644_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21982..22878)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KF86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35685.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
xylose isomerase
L3_108_000G1_scaffold_644_24

Not on your lists

comp(22911..24962)
DNA (2052bp) protein (684aa)
Uncharacterized protein (Fragment) n=1 Tax=termite gut metagenome RepID=S0DDJ0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CCO21022.1}; Flags: Fragment;; TaxID=433724 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="termite gut metagenome.;"
hypothetical protein
L3_108_000G1_scaffold_644_25
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(24977..26230)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037ED1EF
glycoside hydrolase family alpha-L-fucosidase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
L3_108_000G1_scaffold_644_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26230..26934)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44641.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_108_000G1_scaffold_644_27
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27061..28782)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI0003618CF7
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EHQ62982.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
family 1 extracellular solute-binding protein
L3_108_000G1_scaffold_644_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28845..29774)
DNA (930bp) protein (310aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5E9_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN43051.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter permease
L3_108_000G1_scaffold_644_29
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29768..30631)
DNA (864bp) protein (288aa)
ABC-type polysaccharide transport system, permease component n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9G6E7_9BACL
ABC-type polysaccharide transport system, permease component {ECO:0000313|EMBL:GAE05438.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L3_108_000G1_scaffold_644_30
unknown

Not on your lists

comp(30651..30818)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

View Taxonomy