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L3_108_000G1_scaffold_991

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_991_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(51..1199)
DNA (1149bp) protein (383aa)
Galactonate dehydratase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K741_9FIRM
Galactonate dehydratase {ECO:0000313|EMBL:EGN41708.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
dgoD; DgoD protein
L3_108_000G1_scaffold_991_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1196..1825)
DNA (630bp) protein (210aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K742_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EGN41709.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
2-dehydro-3-deoxyphosphogluconate aldolase
L3_108_000G1_scaffold_991_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2344..3129
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K743_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41710.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator IclR-like protein
L3_108_000G1_scaffold_991_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3243..5525)
DNA (2283bp) protein (761aa)
Beta-glucosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K744_9FIRM
Beta-glucosidase {ECO:0000313|EMBL:EGN41711.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase
L3_108_000G1_scaffold_991_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5720..6703
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K745_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41712.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
AraC-type DNA-binding domain-containing proteins
L3_108_000G1_scaffold_991_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6741..6953)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AX23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70394.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_108_000G1_scaffold_991_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7020..9518)
DNA (2499bp) protein (833aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K747_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EGN41714.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
diguanylate kinase signaling protein
L3_108_000G1_scaffold_991_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9681..12557)
DNA (2877bp) protein (959aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; EC=4.3.1.18 {ECO:0000256|SAAS:SAAS00055672};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
dadA; D-serine dehydratase (EC:4.3.1.18)
D-serine ammonia-lyase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K748_9FIRM
L3_108_000G1_scaffold_991_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12582..14057)
DNA (1476bp) protein (492aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K749_9FIRM
dihydrolipoyl dehydrogenase
L3_108_000G1_scaffold_991_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14148..15143)
DNA (996bp) protein (332aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K750_9FIRM
lplA; hypothetical protein
L3_108_000G1_scaffold_991_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15161..16588)
DNA (1428bp) protein (476aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K751_9FIRM
glycine dehydrogenase subunit 2
L3_108_000G1_scaffold_991_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16572..17903)
DNA (1332bp) protein (444aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K752_9FIRM
hypothetical protein
L3_108_000G1_scaffold_991_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17930..18310)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K753_9FIRM
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
gcvH; glycine cleavage system H protein
L3_108_000G1_scaffold_991_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18351..19445)
DNA (1095bp) protein (365aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
gcvT; Aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K755_9FIRM
L3_108_000G1_scaffold_991_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20041..20547)
DNA (507bp) protein (169aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K758_9FIRM
rRNA methylase SpoU family protein
L3_108_000G1_scaffold_991_16
unknown

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comp(20551..20775)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_108_000G1_scaffold_991_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20798..21970)
DNA (1173bp) protein (391aa)
Aminotransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K759_9FIRM
Aminotransferase {ECO:0000313|EMBL:EGN41726.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
aspartate/tyrosine/aromatic aminotransferase
L3_108_000G1_scaffold_991_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21967..22458)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K760_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41727.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
AsnC family transcriptional regulator
L3_108_000G1_scaffold_991_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22500..23480)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K761_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41728.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_000G1_scaffold_991_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23512..25098)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K762_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41729.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
von Willebrand factor A
L3_108_000G1_scaffold_991_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25114..25218)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K763_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41730.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_991_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25388..26143)
DNA (756bp) protein (252aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Exonuclease, DNA polymerase III, epsilon subunit n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K764_9FIRM
Exonuclease, DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EGN41731.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_991_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26140..26820)
DNA (681bp) protein (227aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K765_9FIRM
L3_108_000G1_scaffold_991_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26832..28625)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K766_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41733.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
cobalamin B12-binding domain-containing protein
L3_108_000G1_scaffold_991_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28712..29299)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K767_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41734.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
acetyltransferase
L3_108_000G1_scaffold_991_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29516..30076
DNA (561bp) protein (187aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CRF1_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI71827.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sugar ABC transporter permease
L3_108_000G1_scaffold_991_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30121..30834
DNA (714bp) protein (238aa)
metallo-beta-lactamase l1 (EC:3.5.2.6)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K768_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41735.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_000G1_scaffold_991_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30845..32065)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99549.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
protein of unknown function DUF4143
L3_108_000G1_scaffold_991_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32365..33891)
DNA (1527bp) protein (509aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
galT; galactose-1-phosphate uridylyltransferase GalT (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K771_9FIRM
L3_108_000G1_scaffold_991_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34046..35209)
DNA (1164bp) protein (388aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Galactokinase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K772_9FIRM
galactokinase
Displaying items 1-30 of 37 in total

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