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L3_108_000G1_scaffold_286

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Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_286_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(1..5574)
DNA (5574bp) protein (1858aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26148.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_286_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5639..6772)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2CVL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO26859.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_000G1_scaffold_286_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(7095..7940)
DNA (846bp) protein (282aa)
Phage integrase SAM-like domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBX3_9FIRM
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:CCY26998.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
integrase family protein
L3_108_000G1_scaffold_286_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(8230..10503)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26999.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Helicase associated domain.
L3_108_000G1_scaffold_286_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(10476..11252)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26999.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
DNA or RNA helicases of superfamily II
L3_108_000G1_scaffold_286_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

11641..12894
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27000.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_286_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13182..15476)
DNA (2295bp) protein (765aa)
DGQHR domain protein n=2 Tax=Alistipes RepID=R5V6C3_9BACT
DGQHR domain protein {ECO:0000313|EMBL:CCZ76272.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
DGQHR domain-containing protein
L3_108_000G1_scaffold_286_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15490..16347)
DNA (858bp) protein (286aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; Flags: Fragment;; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA adenine methylase n=2 Tax=Alistipes RepID=R5UDD3_9BACT
DNA adenine methylase Dam
L3_108_000G1_scaffold_286_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(17178..17699)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBY9_9FIRM
L3_108_000G1_scaffold_286_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(17739..18200)
DNA (462bp) protein (154aa)
SsrA-binding protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG13_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
SsrA-binding protein
L3_108_000G1_scaffold_286_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

18458..18748
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27010.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_286_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

18778..19671
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27011.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
cell wall-associated hydrolase, invasion-associated protein
L3_108_000G1_scaffold_286_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(19871..20149)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27012.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_286_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

20317..21309
DNA (993bp) protein (331aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
tRNA-dihydrouridine synthase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBZ4_9FIRM
dihydrouridine synthase DuS
L3_108_000G1_scaffold_286_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(21279..22106)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27014.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
arylamine N-acetyltransferase
L3_108_000G1_scaffold_286_16
unknown

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22324..22581
DNA (258bp) protein (86aa)

This feature has no annotations

L3_108_000G1_scaffold_286_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

22538..23065
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27015.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_286_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


23155..25809
DNA (2655bp) protein (885aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRC2_9FIRM
L3_108_000G1_scaffold_286_19
unknown

Not on your lists

comp(25855..26142)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_108_000G1_scaffold_286_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

26346..27005
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27017.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_286_21
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

27051..27794
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27018.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
S-layer protein
L3_108_000G1_scaffold_286_22
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

28072..28377
DNA (306bp) protein (102aa)
Anti-sigma factor antagonist n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG23_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
anti-sigma F factor antagonist
L3_108_000G1_scaffold_286_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

28394..28846
DNA (453bp) protein (151aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBH0_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CCY27020.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_286_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

28843..29559
DNA (717bp) protein (239aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRC6_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCY27021.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative RNA polymerase sigma factor
L3_108_000G1_scaffold_286_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(29556..30515)
DNA (960bp) protein (320aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQF1_9FIRM
L3_108_000G1_scaffold_286_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

30665..31603
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27023.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_286_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

31629..32111
DNA (483bp) protein (161aa)
YbaK/EbsC protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG27_9FIRM
YbaK/EbsC protein {ECO:0000313|EMBL:CCY27024.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
regulatory protein
L3_108_000G1_scaffold_286_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

32303..32749
DNA (447bp) protein (149aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBH3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY27025.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Predicted transcriptional regulators
L3_108_000G1_scaffold_286_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(32816..33787)
DNA (972bp) protein (324aa)
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRD0_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CCY27026.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_286_30
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(33893..35302)
DNA (1410bp) protein (470aa)
Putative HTH-type transcriptional regulatory protein GabR n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQF6_9FIRM
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:CCY27027.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
transcriptional regulator with HTH domain and aminotransferase domain
Displaying items 1-30 of 87 in total

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