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L3_108_031G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_87_1
Toxocara canis, Toxocara, Ascaridida, Chromadorea, Nematoda, Metazoa

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2..124
DNA (123bp) protein (41aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Harpegnathos saltator RepID=E2C7Q8_HARSA
Putative glycosyltransferase {ECO:0000313|EMBL:KHN87341.1}; Flags: Fragment;; TaxID=6265 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida; Ascaridoidea; Toxocaridae; Toxocara.;" source="Toxocara canis (Canine roundworm).;"
glycosyl transferase
L3_108_031G1_scaffold_87_2
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

261..2747
DNA (2487bp) protein (829aa)
Repeat protein (Fragment) n=1 Tax=Gardnerella vaginalis JCP8066 RepID=S4H7I9_GARVA
Repeat protein {ECO:0000313|EMBL:EPI59311.1}; Flags: Fragment;; TaxID=1261064 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8066.;"
hypothetical protein
L3_108_031G1_scaffold_87_3
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3076..3684
DNA (609bp) protein (203aa)
resolvase n=1 Tax=Gardnerella vaginalis RepID=UPI0003198DEE
Resolvase/integrase {ECO:0000313|EMBL:EIK82318.1}; TaxID=698957 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 1500E.;"
hypothetical protein
L3_108_031G1_scaffold_87_4
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3878..4843
DNA (966bp) protein (322aa)
LPXTG-motif protein cell wall anchor domain protein n=2 Tax=Gardnerella vaginalis RepID=S4GNG3_GARVA
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:EPI45807.1}; TaxID=1261066 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8108.;"
LPXTG cell wall surface protein
L3_108_031G1_scaffold_87_5
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5068..6675
DNA (1608bp) protein (536aa)
Repeat protein (Fragment) n=1 Tax=Gardnerella vaginalis JCP8108 RepID=S4HYU6_GARVA
Repeat protein {ECO:0000313|EMBL:EPI45806.1}; Flags: Fragment;; TaxID=1261066 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8108.;"
hypothetical protein
L3_108_031G1_scaffold_87_6
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7191..8507
DNA (1317bp) protein (439aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EEA85539.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EEA85539.1};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FY93_9FIRM
DNA-cytosine methyltransferase
L3_108_031G1_scaffold_87_7
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8510..9472)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSC5_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL50522.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_108_031G1_scaffold_87_8
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9476..9721)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Gardnerella vaginalis RepID=S4GYJ3_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI56096.1}; TaxID=1261059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7659.;"
hypothetical protein
L3_108_031G1_scaffold_87_9
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9672..11336)
DNA (1665bp) protein (555aa)
DNA repair ATPase n=2 Tax=Gardnerella vaginalis RepID=D6SVP4_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI56095.1}; TaxID=1261059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7659.;"
chromosome segregation ATPase
L3_108_031G1_scaffold_87_10
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11327..11551)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Gardnerella vaginalis RepID=S4H6T6_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI56094.1}; TaxID=1261059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7659.;"
hypothetical protein
L3_108_031G1_scaffold_87_11
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11535..12668)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Gardnerella vaginalis RepID=S4HA93_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EFH27668.1}; TaxID=682147 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis AMD.;"
hypothetical protein
L3_108_031G1_scaffold_87_12
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13071..13688
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Lactobacillus iners SPIN 1401G RepID=F3LZN4_9LACO
Uncharacterized protein {ECO:0000313|EMBL:KGF33220.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
hypothetical protein
L3_108_031G1_scaffold_87_13
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13701..14459
DNA (759bp) protein (253aa)
AntA/AntB antirepressor domain protein n=2 Tax=Firmicutes RepID=B8I846_CLOCE
Antirepressor {ECO:0000313|EMBL:KGF33221.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
AntA/AntB antirepressor domain-containing protein
L3_108_031G1_scaffold_87_14
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14452..14826
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis JCP8108 RepID=S4GUN1_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI45829.1}; TaxID=1261066 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8108.;"
hypothetical protein
L3_108_031G1_scaffold_87_15
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14819..17152
DNA (2334bp) protein (778aa)
Virulence-associated E family protein n=1 Tax=Gardnerella vaginalis 1400E RepID=I4LSB0_GARVA
Virulence-associated E family protein {ECO:0000313|EMBL:EIK79850.1}; TaxID=698956 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 1400E.;"
virulence-associated E family protein
L3_108_031G1_scaffold_87_16
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17381..17686
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 1400E RepID=I4LSB2_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EIK79852.1}; TaxID=698956 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 1400E.;"
VRR-NUC domain-containing protein
L3_108_031G1_scaffold_87_17
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17667..19106
DNA (1440bp) protein (480aa)
Protein, SNF2 family n=1 Tax=Gardnerella vaginalis JCP7276 RepID=S4HB04_GARVA
Protein, SNF2 family {ECO:0000313|EMBL:EPI54280.1}; TaxID=1261058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7276.;"
SNF2 family N-terminal domain protein
L3_108_031G1_scaffold_87_18
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19066..19494
DNA (429bp) protein (143aa)
Sigma-70, region 4 n=1 Tax=Gardnerella vaginalis JCP7659 RepID=S4GYR1_GARVA
Sigma-70, region 4 {ECO:0000313|EMBL:EPI56081.1}; TaxID=1261059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7659.;"
hypothetical protein
L3_108_031G1_scaffold_87_19
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19647..20006
DNA (360bp) protein (120aa)
HNH endonuclease domain protein n=3 Tax=Gardnerella vaginalis RepID=F6A197_GARVH
HNH endonuclease domain protein
HNH endonuclease domain protein {ECO:0000313|EMBL:AEF32023.1}; TaxID=1009464 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis (strain HMP9231).;"
L3_108_031G1_scaffold_87_20
Selenomonas sp. oral taxon 138, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20132..20737
DNA (606bp) protein (202aa)
HNH endonuclease domain protein (Fragment) n=1 Tax=Selenomonas sp. oral taxon 138 str. F0429 RepID=L1N010_9FIRM
HNH endonuclease domain protein {ECO:0000313|EMBL:EKX96848.1}; Flags: Fragment;; TaxID=1127695 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 138 str. F0429.;"
AP2 domain-containing protein
L3_108_031G1_scaffold_87_21
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20770..21321
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis (strain HMP9231) RepID=F6A198_GARVH
phage terminase small subunit
Uncharacterized protein {ECO:0000313|EMBL:AEF31134.1}; TaxID=1009464 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis (strain HMP9231).;"
L3_108_031G1_scaffold_87_22
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21333..22118
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis JCP7276 RepID=S4H236_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EPI54274.1}; TaxID=1261058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7276.;"
S-adenosylmethionine synthetase, N-terminal domain protein
L3_108_031G1_scaffold_87_23
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22133..23401
DNA (1269bp) protein (423aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
DNA methylase n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJT3_GARVA
ParB domain-containing protein nuclease
L3_108_031G1_scaffold_87_24
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23394..24881
DNA (1488bp) protein (496aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJT2_GARVA
L3_108_031G1_scaffold_87_25
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24948..25583
DNA (636bp) protein (212aa)
Virulence-related protein n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJT1_GARVA
Virulence-related protein {ECO:0000313|EMBL:EIK77221.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
hypothetical protein
L3_108_031G1_scaffold_87_26
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25583..25810
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJT0_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EIK77220.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
hypothetical protein
L3_108_031G1_scaffold_87_27
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25925..26101
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJS9_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EIK77219.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
hypothetical protein
L3_108_031G1_scaffold_87_28
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26340..26564
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJS8_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EIK77218.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
hypothetical protein
L3_108_031G1_scaffold_87_29
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26688..28280
DNA (1593bp) protein (531aa)
Terminase, large subunit, putative n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJS7_GARVA
Terminase, large subunit, putative {ECO:0000313|EMBL:EIK77217.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
putative phage terminase, large subunit
L3_108_031G1_scaffold_87_30
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28291..29589
DNA (1299bp) protein (433aa)
HK97 family portal protein , putative n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LJS6_GARVA
HK97 family portal protein , putative {ECO:0000313|EMBL:EIK77216.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
phage portal protein, HK97 family
Displaying items 1-30 of 67 in total

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