ggKbase home page

L3_108_031G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_88_1
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(107..640)
DNA (534bp) protein (178aa)
acyl-CoA hydrolase n=1 Tax=Staphylococcus RepID=UPI000310E095
Acyl-CoA hydrolase {ECO:0000313|EMBL:EUZ67939.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
acyl-CoA thioester hydrolase
L3_108_031G1_scaffold_88_2
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(673..1920)
DNA (1248bp) protein (416aa)
peptidase M29 n=1 Tax=Staphylococcus RepID=UPI0002D59DEF
Aminopeptidase PepS {ECO:0000313|EMBL:EUZ67940.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ampS; peptidase M29, aminopeptidase II
L3_108_031G1_scaffold_88_3
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1932..2138)
DNA (207bp) protein (69aa)
UPF0435 protein STAHO0001_0035 n=2 Tax=Staphylococcus hominis RepID=C2M1D8_STAHO
UPF0435 protein HMPREF0798_01948 {ECO:0000256|HAMAP-Rule:MF_00829}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
hypothetical protein
L3_108_031G1_scaffold_88_4
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2280..2744
DNA (465bp) protein (155aa)
Low molecular weight protein tyrosine phosphatase (EC:3.1.3.48)
protein tyrosine phosphatase n=1 Tax=Staphylococcus RepID=UPI00031675A5
Protein-tyrosine-phosphatase ptpA {ECO:0000313|EMBL:EUZ67942.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
L3_108_031G1_scaffold_88_5
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2750..3031
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Staphylococcus hominis RepID=C2M1E0_STAHO
Uncharacterized protein {ECO:0000313|EMBL:EUZ67943.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_6
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3042..4325
DNA (1284bp) protein (428aa)
ribonuclease BN n=1 Tax=Staphylococcus hominis RepID=UPI000300AC6F
Membrane protein {ECO:0000313|EMBL:EUZ67944.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_7
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4404..5033)
DNA (630bp) protein (210aa)
Response regulator protein VraR n=3 Tax=Staphylococcus hominis RepID=C2M1E2_STAHO
DNA-binding response regulator VraR {ECO:0000313|EMBL:EFS19621.1}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
vraR; LuxR family two component transcriptional regulator
L3_108_031G1_scaffold_88_8
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5035..6069)
DNA (1035bp) protein (345aa)
Sensor protein VraS {ECO:0000256|PIRNR:PIRNR037431}; EC=2.7.13.3 {ECO:0000256|PIRNR:PIRNR037431};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
sensor histidine kinase n=1 Tax=Staphylococcus hominis RepID=UPI000314C8C6
vraS; integral membrane sensor signal transduction histidine kinase
L3_108_031G1_scaffold_88_9
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6066..6767)
DNA (702bp) protein (234aa)
transporter n=1 Tax=Staphylococcus hominis RepID=UPI00030CC252
Uncharacterized protein {ECO:0000313|EMBL:EUZ67947.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_10
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6789..7175)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Staphylococcus hominis RepID=UPI000317A937
Uncharacterized protein {ECO:0000313|EMBL:EUZ67948.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_11
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7852..8604)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
methionine aminopeptidase n=1 Tax=Staphylococcus hominis RepID=UPI0002E57891
M24 family methionyl aminopeptidase
L3_108_031G1_scaffold_88_12
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8778..9767
DNA (990bp) protein (330aa)
membrane protein n=1 Tax=Staphylococcus hominis RepID=UPI0002F7DF24
Uncharacterized protein {ECO:0000313|EMBL:EUZ67950.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_13
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9812..10531)
DNA (720bp) protein (240aa)
CobB/CobQ-like protein n=4 Tax=Staphylococcus hominis RepID=C2M1E9_STAHO
CobB/CobQ-like glutamine amidotransferase {ECO:0000313|EMBL:EUZ67951.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
adenosylcobyric acid synthase
L3_108_031G1_scaffold_88_14
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10519..11844)
DNA (1326bp) protein (442aa)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Staphylococcus hominis RepID=UPI0002F5DEEB
Mur ligase {ECO:0000313|EMBL:EUZ67952.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_15
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12084..12641
DNA (558bp) protein (186aa)
exonuclease, DNA polymerase III, epsilon subunit family domain protein (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Staphylococcus hominis RepID=UPI0002E1DAE7
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EUZ67953.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
L3_108_031G1_scaffold_88_16
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12669..13739)
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA polymerase IV n=1 Tax=Staphylococcus RepID=UPI0002F261A6
dinP; DNA-directed DNA polymerase IV
L3_108_031G1_scaffold_88_17
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13848..14396)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Staphylococcus RepID=UPI00031D27F9
Uncharacterized protein {ECO:0000313|EMBL:EUZ67955.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_88_18
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14533..15894)
DNA (1362bp) protein (454aa)
RNA methyltransferase n=1 Tax=Staphylococcus hominis RepID=UPI0002E86987
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EUZ67956.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
RNA methyltransferase, TrmA family
L3_108_031G1_scaffold_88_19
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16025..16945)
DNA (921bp) protein (307aa)
lipid kinase n=1 Tax=Staphylococcus hominis RepID=UPI0002EABFF4
Diacylglycerol kinase {ECO:0000313|EMBL:EUZ67957.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
lipid kinase
L3_108_031G1_scaffold_88_20
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17259..18686)
DNA (1428bp) protein (476aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
aspartyl/glutamyl-tRNA amidotransferase subunit B n=1 Tax=Staphylococcus RepID=UPI0002FCE059
L3_108_031G1_scaffold_88_21
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18699..20156)
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
aspartyl/glutamyl-tRNA amidotransferase subunit A n=1 Tax=Staphylococcus RepID=UPI0002E0F575
gatA; Aspartyl/glutamyl-tRNA amidotransferase subunit A
L3_108_031G1_scaffold_88_22
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20158..20487)
DNA (330bp) protein (110aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=3 Tax=Staphylococcus hominis RepID=C2M1F8_STAHO
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
L3_108_031G1_scaffold_88_23
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20834..22420
DNA (1587bp) protein (529aa)
proline:sodium symporter n=1 Tax=Staphylococcus RepID=UPI0002E44A97
Sodium/proline symporter {ECO:0000313|EMBL:EUZ67961.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
putP; SSS family solute:sodium (Na+)/proline symporter
L3_108_031G1_scaffold_88_24
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22480..23679)
DNA (1200bp) protein (400aa)
pheromone cAM373 lipoprotein CamS n=1 Tax=Staphylococcus RepID=UPI0003025B50
Lipoprotein {ECO:0000313|EMBL:EUZ67962.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
camS; hypothetical protein
L3_108_031G1_scaffold_88_25
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23691..25694)
DNA (2004bp) protein (668aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA ligase LigA n=1 Tax=Staphylococcus hominis RepID=UPI0002DBDC07
lig; DNA ligase
L3_108_031G1_scaffold_88_26
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25698..27890)
DNA (2193bp) protein (731aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI000374BC79
pcrA; ATP-depentend DNA helicase
L3_108_031G1_scaffold_88_27
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27890..28582)
DNA (693bp) protein (231aa)
Heptaprenylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=HepGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.n9 {ECO:0000256|HAMAP-Rule:MF_00112};; Glycerol-1-phosphate heptaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
geranylgeranylglyceryl phosphate synthase n=1 Tax=Staphylococcus hominis RepID=UPI0002FD4C5E
pcrB; glycerol-1-phosphate prenyltransferase
L3_108_031G1_scaffold_88_28
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28742..29044)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Staphylococcus RepID=UPI0002D90895
DNA-binding protein {ECO:0000313|EMBL:EUZ67966.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
His repressor
L3_108_031G1_scaffold_88_29
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29149..30444)
DNA (1296bp) protein (432aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
purB; adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase n=1 Tax=Staphylococcus hominis RepID=UPI0002E9EF40
L3_108_031G1_scaffold_88_30
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30667..30849)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI00035E9509
Hypothetical Cytosolic Protein {ECO:0000313|EMBL:EFS19598.1}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
hypothetical protein
Displaying items 1-30 of 61 in total

View Taxonomy