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L3_108_031G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_152_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..186
DNA (186bp) protein (62aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=Q8CS18_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59964.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

268..1002
DNA (735bp) protein (245aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q5HNA8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59963.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_3
unknown

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comp(1249..1410)
DNA (162bp) protein (54aa)
Uncharacterized protein n=7 Tax=Staphylococcus epidermidis RepID=J0GI42_STAEP
L3_108_031G1_scaffold_152_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1382..1594)
DNA (213bp) protein (71aa)
Phage phi PVL amidase-like protein n=38 Tax=Staphylococcus epidermidis RepID=Q8CNT2_STAES
ORF007
Uncharacterized protein {ECO:0000313|EMBL:EFE59962.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1753..2247
DNA (495bp) protein (165aa)
Site-specific recombinase, phage integrase family n=39 Tax=Staphylococcus epidermidis RepID=D4FI38_STAEP
Phage integrase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFE59961.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_6

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comp(3512..4066)
DNA (555bp) protein (185aa)
Uncharacterized protein n=37 Tax=Staphylococcus epidermidis RepID=Q5HNA7_STAEQ
serine hydrolase family protein
Putative esterase {ECO:0000313|EMBL:ETJ20082.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_152_7

Not on your lists

comp(4202..5650)
DNA (1449bp) protein (483aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=12 Tax=Staphylococcus epidermidis RepID=Q5HNA6_STAEQ
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ETJ20083.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_152_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5743..6666)
DNA (924bp) protein (308aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ferrochelatase n=44 Tax=Staphylococcus epidermidis RepID=HEMH_STAEQ
L3_108_031G1_scaffold_152_9

Not on your lists

comp(6743..7822)
DNA (1080bp) protein (360aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=3 Tax=Staphylococcus epidermidis RepID=V6QAM8_STAEP
Uroporphyrinogen decarboxylase {ECO:0000313|EMBL:ETJ20085.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_152_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8097..8600
DNA (504bp) protein (168aa)
Antibiotic biosynthesis monooxygenase n=14 Tax=Staphylococcus epidermidis RepID=F3TPP7_STAEP
Uncharacterized protein, homolog of B.subtilis yhgC
Signal transduction protein TRAP; Target of RNAIII-activating protein; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_152_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9157..9780)
DNA (624bp) protein (208aa)
Cadmium resistance transporter family protein n=2 Tax=Staphylococcus epidermidis RepID=F3SZL5_STAEP
Cadmium resistance protein
Cadmium resistance transporter family protein {ECO:0000313|EMBL:EFE60069.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_12

Not on your lists

comp(9839..11086)
DNA (1248bp) protein (416aa)
Bacterial ABC transporter protein EcsB n=16 Tax=Staphylococcus epidermidis RepID=F9LJK3_STAEP
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ20088.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
bacterial ABC transporter EcsB family protein
L3_108_031G1_scaffold_152_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11055..11795)
DNA (741bp) protein (247aa)
ABC transporter ecsA-like protein n=51 Tax=Staphylococcus epidermidis RepID=Q8CNR6_STAES
ABC transporter ecsA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE60067.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_14

Not on your lists

11925..12350
DNA (426bp) protein (142aa)
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC:3.6.1.17)
HIT family protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HN99_STAEQ
HIT histidine triad cell-cycle regulator {ECO:0000313|EMBL:ETJ20090.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_152_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12427..12798
DNA (372bp) protein (124aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HN98_STAEQ
Hypothetical protein SAV1839
Uncharacterized protein {ECO:0000313|EMBL:EFE60065.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12964..13524
DNA (561bp) protein (187aa)
Uncharacterized protein n=54 Tax=Staphylococcus epidermidis RepID=Q5HN97_STAEQ
Hypothetical protein SAV1840
Uncharacterized protein {ECO:0000313|EMBL:AAW54760.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_152_17

Not on your lists

13727..14704
DNA (978bp) protein (326aa)
Foldase protein PrsA n=38 Tax=Staphylococcus epidermidis RepID=PRSA_STAEQ
protein export protein PrsA
Foldase protein prsA {ECO:0000313|EMBL:ETJ20093.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_152_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15130..16071)
DNA (942bp) protein (314aa)
Cmp-binding-factor 1 n=41 Tax=Staphylococcus epidermidis RepID=Q5HN94_STAEQ
CMP-binding-factor 1
HD domain protein {ECO:0000313|EMBL:EFE60062.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16068..19007)
DNA (2940bp) protein (980aa)
Uncharacterized protein n=22 Tax=Staphylococcus epidermidis RepID=Q5HN93_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:EFE60061.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
DNA double-strand break repair rad50 ATPase
L3_108_031G1_scaffold_152_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18997..20193)
DNA (1197bp) protein (399aa)
DNA repair exonuclease family protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HN92_STAEQ
DNA repair exonuclease
DNA repair exonuclease family protein {ECO:0000313|EMBL:AAW54765.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_152_21

Not on your lists

comp(20464..20808)
DNA (345bp) protein (115aa)
UPF0342 protein SERP1381 n=78 Tax=Staphylococcus epidermidis RepID=Y1381_STAEQ
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ETJ20097.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_152_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20881..22014)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=39 Tax=Staphylococcus epidermidis RepID=C5QA45_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE60058.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22193..22657)
DNA (465bp) protein (155aa)
Transcriptional regulator, Cro/CI family n=79 Tax=Staphylococcus epidermidis RepID=Q5HN89_STAEQ
HTH domain protein SA1665, binds to mecA promoter region
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EES35839.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L3_108_031G1_scaffold_152_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22928..23551)
DNA (624bp) protein (208aa)
DNA-binding response regulator, LuxR family n=77 Tax=Staphylococcus epidermidis RepID=Q5HN88_STAEQ
Two-component response regulator-like protein
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESV18735.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_108_031G1_scaffold_152_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23544..24677)
DNA (1134bp) protein (378aa)
Nitrate/nitrite sensor protein (EC:2.7.3.-)
Two-component sensor histidine kinase-like protein n=48 Tax=Staphylococcus epidermidis RepID=Q8CRX7_STAES
Histidine kinase {ECO:0000313|EMBL:EFE60055.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24836..25660
DNA (825bp) protein (275aa)
Ribosomal large subunit pseudouridine synthase, RluD subfamily n=45 Tax=Staphylococcus epidermidis RepID=Q5HN86_STAEQ
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type
Ribosomal large subunit pseudouridine synthase, RluD subfamily {ECO:0000313|EMBL:AAW54714.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_152_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26021..27406)
DNA (1386bp) protein (462aa)
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Fumarate hydratase class II n=49 Tax=Staphylococcus epidermidis RepID=FUMC_STAEQ
L3_108_031G1_scaffold_152_28
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27591..27995)
DNA (405bp) protein (135aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q5HN84_STAEQ
Hypothetical protein SAV1852
Uncharacterized protein {ECO:0000313|EMBL:ETJ14709.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_152_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28151..28333)
DNA (183bp) protein (61aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN83_STAEQ
Hypothetical protein SAV1853
Uncharacterized protein {ECO:0000313|EMBL:EFE60051.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_152_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28354..28953)
DNA (600bp) protein (200aa)
Glucosamine-6-phosphate isomerase family protein n=31 Tax=Staphylococcus epidermidis RepID=Q5HN82_STAEQ
glucosamine-6-phosphate isomerase family protein
Glucosamine-6-phosphate isomerase family protein {ECO:0000313|EMBL:EFE60050.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 33 in total

View Taxonomy