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L3_108_031G1_scaffold_168

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_168_1
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(392..2785)
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPW6_9FIRM
pheT; phenylalanyl-tRNA synthetase subunit beta
L3_108_031G1_scaffold_168_2
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2798..3877)
DNA (1080bp) protein (360aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Peptostreptococcus RepID=L1MG48_9FIRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
L3_108_031G1_scaffold_168_3
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4300..5082)
DNA (783bp) protein (261aa)
RNA methyltransferase, TrmH family n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MGD6_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EKX90029.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
RNA methylase
L3_108_031G1_scaffold_168_4
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5094..5747)
DNA (654bp) protein (218aa)
TrkA N-terminal domain protein n=3 Tax=Peptostreptococcus RepID=D3MPW3_9FIRM
TrkA-N domain protein {ECO:0000313|EMBL:CCY50346.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
cation transport protein
L3_108_031G1_scaffold_168_5
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5845..7212)
DNA (1368bp) protein (456aa)
Potassium uptake protein, TrkH family n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MFL4_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EKX90027.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
putative cation transport protein, Trk family
L3_108_031G1_scaffold_168_6
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7428..9491)
DNA (2064bp) protein (688aa)
Sulfatase domain protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5JCC5_9FIRM
Sulfatase domain protein {ECO:0000313|EMBL:CCY50344.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
hypothetical protein
L3_108_031G1_scaffold_168_7
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9494..10453)
DNA (960bp) protein (320aa)
Surface surface protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5J6Z1_9FIRM
Surface surface protein {ECO:0000313|EMBL:CCY50343.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
surface protein
L3_108_031G1_scaffold_168_8
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10738..11058)
DNA (321bp) protein (107aa)
Preprotein translocase, YajC subunit n=3 Tax=Peptostreptococcus RepID=D3MPV8_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EKX90023.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
putative protein translocase subunit
L3_108_031G1_scaffold_168_9
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11114..12232)
DNA (1119bp) protein (373aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPV7_9FIRM
tgt; queuine tRNA-ribosyltransferase
L3_108_031G1_scaffold_168_10
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12329..13351)
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MG38_9FIRM
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L3_108_031G1_scaffold_168_11
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13370..14386)
DNA (1017bp) protein (339aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Peptostreptococcus RepID=D3MPV5_9FIRM
ruvB; Holliday junction DNA helicase RuvB
L3_108_031G1_scaffold_168_12
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14400..15023)
DNA (624bp) protein (208aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
ruvA; Holliday junction ATP-dependent DNA helicaseRuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MFI5_9FIRM
L3_108_031G1_scaffold_168_13
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15159..15653)
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Peptostreptococcus RepID=L1MFK4_9FIRM
ruvC; Holliday junction resolvase
L3_108_031G1_scaffold_168_14
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16045..16629
DNA (585bp) protein (195aa)
DNA-binding helix-turn-helix protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPV2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFD05852.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
DNA-binding protein
L3_108_031G1_scaffold_168_15
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16789..17610)
DNA (822bp) protein (274aa)
3D domain protein n=2 Tax=Peptostreptococcus RepID=L1MG33_9FIRM
3D domain protein {ECO:0000313|EMBL:EKX90015.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
hypothetical protein
L3_108_031G1_scaffold_168_16
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17872..18576
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Peptostreptococcus RepID=D3MPV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY49482.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
hypothetical protein
L3_108_031G1_scaffold_168_17
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18593..18910
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=D3MPU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD05840.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
lipoprotein
L3_108_031G1_scaffold_168_18
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18964..19623)
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=3 Tax=Peptostreptococcus RepID=D3MPU8_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCY49480.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
TetR/AcrR family transcriptional regulator
L3_108_031G1_scaffold_168_19
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19806..20162)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=3 Tax=Peptostreptococcus RepID=D3MPU7_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
rplT; 50S ribosomal protein L20
L3_108_031G1_scaffold_168_20
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20187..20384)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=3 Tax=Peptostreptococcus RepID=D3MPU6_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
rpmI; 50S ribosomal protein L35
L3_108_031G1_scaffold_168_21
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20411..20812)
DNA (402bp) protein (134aa)
Translation initiation factor IF-3 n=3 Tax=Peptostreptococcus RepID=D3MPU5_9FIRM
Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
infC; translation initiation factor IF-3
L3_108_031G1_scaffold_168_22
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21339..22205)
DNA (867bp) protein (289aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Methionine aminopeptidase n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPU4_9FIRM
methionine aminopeptidase
L3_108_031G1_scaffold_168_23
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22439..23056
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=L1MFJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY49520.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
hypothetical protein
L3_108_031G1_scaffold_168_24
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23459..23971
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
Ferritin n=2 Tax=Peptostreptococcus RepID=R5JA88_9FIRM
ferritin
L3_108_031G1_scaffold_168_25
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24143..26068)
DNA (1926bp) protein (642aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=2 Tax=Peptostreptococcus RepID=L1MG21_9FIRM
L3_108_031G1_scaffold_168_26
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26461..27519)
DNA (1059bp) protein (353aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
buk; putative butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=2 Tax=Peptostreptococcus RepID=L1MGB4_9FIRM
L3_108_031G1_scaffold_168_27
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27561..28457)
DNA (897bp) protein (299aa)
Phosphate butyryltransferase (EC:2.3.1.19)
Phosphate acetyl/butyryl transferase n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPD1_9FIRM
Phosphate acetyl/butyryl transferase {ECO:0000313|EMBL:EFD06010.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Displaying 27 items

View Taxonomy