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L3_108_031G1_scaffold_189

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_189_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..1508)
DNA (1506bp) protein (502aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Malate:quinone oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase 4 n=60 Tax=Staphylococcus epidermidis RepID=MQO4_STAES
L3_108_031G1_scaffold_189_2
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1687..2505)
DNA (819bp) protein (273aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Putative pyruvate, phosphate dikinase regulatory protein 2 n=51 Tax=Staphylococcus epidermidis RepID=PDRP2_STAEQ
kinase/pyrophosphorylase family protein
L3_108_031G1_scaffold_189_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2507..5134)
DNA (2628bp) protein (876aa)
Pyruvate,phosphate dikinase (EC:2.7.9.1)
Phosphoenolpyruvate-protein phosphatase n=36 Tax=Staphylococcus epidermidis RepID=Q8CR11_STAES
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ETJ14103.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_189_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5482..7077)
DNA (1596bp) protein (532aa)
Acetate-CoA ligase n=43 Tax=Staphylococcus epidermidis RepID=Q8CR10_STAES
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Putative Butyrate-CoA ligase {ECO:0000313|EMBL:ETJ14102.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_189_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7414..7860)
DNA (447bp) protein (149aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q8CR09_STAES
hypothetical protein
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EFE58952.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_189_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7888..8106)
DNA (219bp) protein (73aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q8CR08_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58953.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_189_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8553..9728)
DNA (1176bp) protein (392aa)
Amidohydrolase family protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HL12_STAEQ
aminoacylase
Amidohydrolase family protein {ECO:0000313|EMBL:AAW52968.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_189_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10050..11768)
DNA (1719bp) protein (573aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Oxygen-dependent choline dehydrogenase n=79 Tax=Staphylococcus epidermidis RepID=BETA_STAES
L3_108_031G1_scaffold_189_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11928..13418)
DNA (1491bp) protein (497aa)
Betaine aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000256|SAAS:SAAS00007649}; EC=1.2.1.8 {ECO:0000256|SAAS:SAAS00007649};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Betaine aldehyde dehydrogenase n=42 Tax=Staphylococcus epidermidis RepID=Q5HL10_STAEQ
L3_108_031G1_scaffold_189_10

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13887..14453
DNA (567bp) protein (189aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=Q8CR07_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21168.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_189_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14500..16104)
DNA (1605bp) protein (535aa)
Choline transporter n=47 Tax=Staphylococcus epidermidis RepID=Q8CMY0_STAES
High-affinity choline uptake protein BetT
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFE58958.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_189_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16543..17841)
DNA (1299bp) protein (433aa)
Anaerobic dicarboxylate transport n=58 Tax=Staphylococcus epidermidis RepID=Q8CMX9_STAES
Anaerobic C4-dicarboxylate membrane transporter
Anaerobic C4-dicarboxylate membrane transporter {ECO:0000313|EMBL:AAW52983.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_189_13

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comp(18205..18741)
DNA (537bp) protein (179aa)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HL05_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:ETJ21171.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_189_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18738..20588)
DNA (1851bp) protein (617aa)
Ribonucleotide reductase of class III (anaerobic), large subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EFE58961.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EFE58961.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Anaerobic ribonucleoside-triphosphate reductase n=26 Tax=Staphylococcus epidermidis RepID=Q5HL04_STAEQ
L3_108_031G1_scaffold_189_15

Not on your lists

comp(20907..21212)
DNA (306bp) protein (102aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HL03_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21173.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_189_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21536..22135)
DNA (600bp) protein (200aa)
cysC; adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Adenylyl-sulfate kinase n=43 Tax=Staphylococcus epidermidis RepID=CYSC_STAEQ
L3_108_031G1_scaffold_189_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22151..23191)
DNA (1041bp) protein (347aa)
sat; sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000255|HAMAP-Rule:MF_00066};; ATP-sulfurylase {ECO:0000255|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000255|HAMAP-Rule:MF_00066}; Short=SAT {ECO:0000255|HAMAP-Rule:MF_00066};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Sulfate adenylyltransferase n=12 Tax=Staphylococcus epidermidis RepID=D4FL07_STAEP
Displaying 17 items

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