ggKbase home page

L3_108_031G1_scaffold_201

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_201_1
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(242..1612)
DNA (1371bp) protein (457aa)
GntR family transcriptional regulator n=1 Tax=Staphylococcus hominis RepID=UPI0003110A07
Uncharacterized protein {ECO:0000313|EMBL:EUZ67686.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_031G1_scaffold_201_2
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1708..2595
DNA (888bp) protein (296aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
pyridoxal biosynthesis protein n=1 Tax=Staphylococcus hominis RepID=UPI0003103703
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit
L3_108_031G1_scaffold_201_3
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2599..3153
DNA (555bp) protein (185aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
glutamine amidotransferase n=1 Tax=Staphylococcus RepID=UPI000305FA4A
pyridoxine biosynthesis amidotransferase
L3_108_031G1_scaffold_201_4
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3191..4405)
DNA (1215bp) protein (405aa)
pyrimidine nucleoside transporter NupC n=1 Tax=Staphylococcus RepID=UPI0002FC18C5
Pyrimidine nucleoside transporter {ECO:0000313|EMBL:EUZ67689.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
nupC; pyrimidine nucleoside transport protein
L3_108_031G1_scaffold_201_5
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4559..5020
DNA (462bp) protein (154aa)
Transcriptional repressor of CtsR n=2 Tax=Staphylococcus hominis RepID=C2LYJ9_STAHO
Transcriptional regulator CtsR {ECO:0000313|EMBL:EFS19537.1}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
ctsR; hypothetical protein
L3_108_031G1_scaffold_201_6
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5052..5615
DNA (564bp) protein (188aa)
excinuclease ABC subunit B n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI00035F2E55
UvrB/uvrC domain-containing protein {ECO:0000313|EMBL:EUZ67691.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
cstR; modulator of heat shock repressor CtsR
L3_108_031G1_scaffold_201_7
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5605..6615
DNA (1011bp) protein (337aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ATP:guanido phosphotransferase n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI00037CFE33
D-isomer specific 2-hydroxyacid dehydrogenase family protein
L3_108_031G1_scaffold_201_8
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6631..9102
DNA (2472bp) protein (824aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Staphylococcus RepID=UPI00031B9A7A
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:EUZ67693.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
Clp protease ATP binding subunit
L3_108_031G1_scaffold_201_9
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9209..10609
DNA (1401bp) protein (467aa)
DNA repair protein RadA n=1 Tax=Staphylococcus RepID=UPI00031F655C
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
radA; DNA repair protein RadA
L3_108_031G1_scaffold_201_10
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10632..11705
DNA (1074bp) protein (358aa)
membrane protein n=1 Tax=Staphylococcus hominis RepID=UPI0002F65177
PIN domain-containing protein {ECO:0000313|EMBL:EUZ67695.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
Integral membrane protein (PIN domain superfamily)
L3_108_031G1_scaffold_201_11
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11983..13437
DNA (1455bp) protein (485aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
glutamyl-tRNA synthase n=1 Tax=Staphylococcus RepID=UPI00031980DA
gltX; glutamyl-tRNA synthetase
L3_108_031G1_scaffold_201_12
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13824..14453
DNA (630bp) protein (210aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
serine acetyltransferase n=1 Tax=Staphylococcus hominis RepID=UPI0002E48544
cysE; serine O-acetyltransferase
L3_108_031G1_scaffold_201_13
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14437..15837
DNA (1401bp) protein (467aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Staphylococcus RepID=UPI0002F8DAC0
L3_108_031G1_scaffold_201_14
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15839..16225
DNA (387bp) protein (129aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ribonuclease III n=1 Tax=Staphylococcus RepID=UPI0002EAA1EC
ribonuclease III
L3_108_031G1_scaffold_201_15
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16225..16983
DNA (759bp) protein (253aa)
RNA methyltransferase n=1 Tax=Staphylococcus hominis RepID=UPI0002F03DB1
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EUZ67700.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
yacO; TrmH family RNA methyltransferase
L3_108_031G1_scaffold_201_16
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16980..17510
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Staphylococcus RepID=UPI0003091F78
Uncharacterized protein {ECO:0000313|EMBL:EUZ67701.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
YacP-like NYN domain protein
L3_108_031G1_scaffold_201_17
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17578..18168
DNA (591bp) protein (197aa)
Sigma-70 region 2 subfamily n=2 Tax=Staphylococcus hominis RepID=E5CLK8_STAHO
Sigma-70 region 2 subfamily {ECO:0000313|EMBL:EFS19525.1}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
RNA polymerase factor sigma-70
L3_108_031G1_scaffold_201_18
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18361..18636
DNA (276bp) protein (92aa)
Protein translocase subunit SecE n=3 Tax=Staphylococcus hominis RepID=C2LYI5_STAHO
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
secE; preprotein translocase subunit SecE
L3_108_031G1_scaffold_201_19
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18654..19202
DNA (549bp) protein (183aa)
Transcription termination/antitermination protein NusG n=3 Tax=Staphylococcus hominis RepID=C2LYI4_STAHO
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
hypothetical protein
L3_108_031G1_scaffold_201_20
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


19389..19811
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=71 Tax=Staphylococcus RepID=RL11_STAEQ
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemolyticus (strain JCSC1435).;"
L3_108_031G1_scaffold_201_21
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


20018..20713
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=3 Tax=Staphylococcus hominis RepID=C2LYI2_STAHO
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
rplA; 50S ribosomal protein L1
L3_108_031G1_scaffold_201_22
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


21024..21524
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=3 Tax=Staphylococcus hominis RepID=C2LYI1_STAHO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
rplJ; 50S ribosomal protein L10
L3_108_031G1_scaffold_201_23
Staphylococcus arlettae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


21564..21656
DNA (93bp) protein (31aa)
50S ribosomal protein L7/L12 n=2 Tax=Staphylococcus pseudintermedius RepID=E8SJ19_STAPH
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1212545 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus arlettae CVD059.;"
Displaying 23 items

View Taxonomy