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L3_108_031G1_scaffold_220

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_220_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..297
DNA (297bp) protein (99aa)
Cell wall surface anchor family protein n=4 Tax=Staphylococcus epidermidis RepID=Q5HQ38_STAEQ
cell wall surface anchor family protein
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EFE59554.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_220_2
Staphylococcus gallinarum, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(777..950)
DNA (174bp) protein (58aa)
50S ribosomal protein L32 n=81 Tax=Staphylococcus RepID=RL32_STAEQ
LSU ribosomal protein L32p
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1293 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus gallinarum.;"
L3_108_031G1_scaffold_220_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1028..1582)
DNA (555bp) protein (185aa)
Uncharacterized protein n=74 Tax=Staphylococcus epidermidis RepID=Q5HQ40_STAEQ
YlbN-like protein
Putative nucleic acid-binding protein {ECO:0000313|EMBL:ETJ08351.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_220_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1709..2842
DNA (1134bp) protein (378aa)
UPF0348 protein SE_0825 n=39 Tax=Staphylococcus epidermidis RepID=Y825_STAES
FIG007079: UPF0348 protein family
UPF0348 protein Q614_SASC00376G0003 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_220_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3246..3731)
DNA (486bp) protein (162aa)
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; EC=2.7.7.3 {ECO:0000255|HAMAP-Rule:MF_00151};; Dephospho-CoA pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; Short=PPAT {ECO:0000255|HAMAP-Rule:MF_00151};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Phosphopantetheine adenylyltransferase n=51 Tax=Staphylococcus epidermidis RepID=COAD_STAEQ
L3_108_031G1_scaffold_220_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3733..4296)
DNA (564bp) protein (188aa)
Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.-)
RNA methyltransferase, RsmD family n=21 Tax=Staphylococcus epidermidis RepID=C5QWB2_STAEP
Putative rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:ETJ08354.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_220_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4342..4731
DNA (390bp) protein (130aa)
Uncharacterized protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HQ44_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59560.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_220_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4741..4992)
DNA (252bp) protein (84aa)
UPF0298 protein SERP0712 n=72 Tax=Staphylococcus epidermidis RepID=Y712_STAEQ
hypothetical protein
UPF0298 protein Q614_SASC00376G0007 {ECO:0000256|HAMAP-Rule:MF_01126}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_220_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5213..6139
DNA (927bp) protein (309aa)
Glycerophosphoryl diester phosphodiesterase, putative n=45 Tax=Staphylococcus epidermidis RepID=Q5HQ47_STAEQ
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase, putative {ECO:0000313|EMBL:AAW54062.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_220_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6654..7088)
DNA (435bp) protein (145aa)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HQ48_STAEQ
hypothetical protein
YlbF like protein {ECO:0000313|EMBL:ETJ08358.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_108_031G1_scaffold_220_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7109..8161)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=20 Tax=Staphylococcus epidermidis RepID=Q5HQ49_STAEQ
Allergen V5/Tpx-1 related
SCP-like protein {ECO:0000313|EMBL:EFE59564.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_220_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8603..9064)
DNA (462bp) protein (154aa)
Uncharacterized protein n=54 Tax=Staphylococcus epidermidis RepID=Q5HQ50_STAEQ
Putative Heme biosynthesis related protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54114.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_220_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9090..10001)
DNA (912bp) protein (304aa)
Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB (EC:2.5.1.-)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Protoheme IX farnesyltransferase n=29 Tax=Staphylococcus epidermidis RepID=COXX_STAEQ
L3_108_031G1_scaffold_220_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10284..11210
DNA (927bp) protein (309aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01664, ECO:0000256|SAAS:SAAS00010542}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01664};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01664, ECO:0000256|SAAS:SAAS00010558};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Rule:MF_01664}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Heme A synthase n=4 Tax=Staphylococcus epidermidis RepID=C5Q8C6_STAEP
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA
L3_108_031G1_scaffold_220_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11359..14814)
DNA (3456bp) protein (1152aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase n=2 Tax=Staphylococcus epidermidis RepID=C5Q8C5_STAEP
L3_108_031G1_scaffold_220_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15204..16427)
DNA (1224bp) protein (408aa)
Cell division protein, FtsW/RodA/SpoVE family n=43 Tax=Staphylococcus epidermidis RepID=Q5HQ54_STAEQ
cell cycle protein FtsW
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EFE59569.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_220_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16829..17104)
DNA (276bp) protein (92aa)
UPF0358 protein SERP0701 n=82 Tax=Staphylococcus epidermidis RepID=Y701_STAEQ
hypothetical protein
UPF0358 protein SE_0811 {ECO:0000255|HAMAP-Rule:MF_01560}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_108_031G1_scaffold_220_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17249..17731
DNA (483bp) protein (161aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HQ57_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59571.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_220_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17733..17888
DNA (156bp) protein (52aa)
Uncharacterized protein n=41 Tax=Staphylococcus epidermidis RepID=Q5HQ58_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54092.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_220_20
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17912..18163)
DNA (252bp) protein (84aa)
Uncharacterized protein n=10 Tax=Staphylococcus epidermidis RepID=J0G4Q7_STAEP
transposase
Transposase for IS1272 {ECO:0000313|EMBL:BAE04842.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemolyticus (strain JCSC1435).;"
L3_108_031G1_scaffold_220_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18358..18564)
DNA (207bp) protein (69aa)
Uncharacterized protein n=28 Tax=Staphylococcus epidermidis RepID=D1WPA4_STAEP
truncated transposase
Uncharacterized protein {ECO:0000313|EMBL:EFE58571.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying 21 items

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