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L3_108_031G1_scaffold_279

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_279_1
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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181..408
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) RepID=A5N0I9_CLOK5
hypothetical protein
Strain B4064 NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIO68705.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
L3_108_031G1_scaffold_279_2
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

471..1475
DNA (1005bp) protein (335aa)
Recombinase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UL07_9FIRM
Recombinase {ECO:0000313|EMBL:ERT59986.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
site-specific recombinase, DNA invertase Pin
L3_108_031G1_scaffold_279_3
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1426..1725
DNA (300bp) protein (100aa)
Recombinase n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UL07_9FIRM
Recombinase {ECO:0000313|EMBL:ERT59986.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
site-specific recombinase, DNA invertase Pin
L3_108_031G1_scaffold_279_4
unknown

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1722..1811
DNA (90bp) protein (30aa)

This feature has no annotations

L3_108_031G1_scaffold_279_5
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2039..2266
DNA (228bp) protein (76aa)
Helix-turn-helix n=2 Tax=Clostridiales RepID=D4KL77_9FIRM
Helix-turn-helix.
Uncharacterized protein {ECO:0000313|EMBL:EFD05945.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
L3_108_031G1_scaffold_279_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2377..3057
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z396_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52562.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_108_031G1_scaffold_279_7
unknown

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3091..3360
DNA (270bp) protein (90aa)

This feature has no annotations

L3_108_031G1_scaffold_279_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3382..4632
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B5605A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF86221.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
L3_108_031G1_scaffold_279_9
unknown

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4645..4914
DNA (270bp) protein (90aa)

This feature has no annotations

L3_108_031G1_scaffold_279_10
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4918..5253
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B53DDF
Uncharacterized protein {ECO:0000313|EMBL:EPD64807.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_108_031G1_scaffold_279_11
unknown

Not on your lists

5271..5399
DNA (129bp) protein (43aa)

This feature has no annotations

L3_108_031G1_scaffold_279_12
Atopobium vaginae, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5523..6524
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=F1T6J4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGF22814.1}; TaxID=525256 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium vaginae DSM 15829.;"
hypothetical protein
L3_108_031G1_scaffold_279_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6833..7273
DNA (441bp) protein (147aa)
hsdR2; type-1 restriction enzyme R protein HsdR (EC:3.1.21.3)
Type I restriction enzyme endonuclease subunit n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TKL3_9FIRM
Type I restriction enzyme endonuclease subunit {ECO:0000313|EMBL:CCZ66273.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_108_031G1_scaffold_279_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7363..9153
DNA (1791bp) protein (597aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36009.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
GTPase subunit of restriction endonuclease
L3_108_031G1_scaffold_279_15
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9153..9851
DNA (699bp) protein (233aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B7E8_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEG90841.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
GTPase subunit of restriction endonuclease
L3_108_031G1_scaffold_279_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9848..10324
DNA (477bp) protein (159aa)
MFS transporter n=1 Tax=Streptococcus marimammalium RepID=UPI00035F852A
5-methylcytosine-specific restriction enzyme subunit McrC {ECO:0000313|EMBL:CRH77985.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
5-methylcytosine-specific restriction enzyme subunit McrC
L3_108_031G1_scaffold_279_17
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10421..10738)
DNA (318bp) protein (106aa)
Toxin-antitoxin system, toxin component, RelE family n=4 Tax=Gardnerella vaginalis RepID=S4GXU2_GARVA
Addiction module toxin RelE {ECO:0000313|EMBL:KGF11909.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus sp. MV1.;"
addiction module toxin RelE
L3_108_031G1_scaffold_279_18
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10735..11040)
DNA (306bp) protein (102aa)
Addiction module antitoxin, RelB/DinJ family protein n=1 Tax=Gardnerella vaginalis 00703C2mash RepID=I4M7E8_GARVA
Toxin-antitoxin system protein {ECO:0000313|EMBL:KGF11910.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus sp. MV1.;"
RelB/DinJ family addiction module antitoxin
L3_108_031G1_scaffold_279_19
Streptococcus constellatus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11262..11735
DNA (474bp) protein (158aa)
tail tape measure protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002D2A986
hypothetical protein
Phage tail tape measure protein, TP901-like family protein {ECO:0000313|EMBL:EGV07838.1}; Uncharacterized protein {ECO:0000313|EMBL:GAD44000.1}; TaxID=1035184 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377.;"
L3_108_031G1_scaffold_279_20
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12185..14299
DNA (2115bp) protein (705aa)
Uncharacterized protein (Fragment) n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W151_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD33523.1}; Flags: Fragment;; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
Displaying 20 items

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