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L3_108_031G1_scaffold_287

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_287_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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15..1214
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase (EC:4.1.1.36)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFE59494.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFE59494.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFE59494.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Pantothenate metabolism flavoprotein n=38 Tax=Staphylococcus epidermidis RepID=Q8CPJ1_STAES
L3_108_031G1_scaffold_287_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1214..3622
DNA (2409bp) protein (803aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
PriA ,primosomal protein n=9 Tax=Staphylococcus epidermidis RepID=Q8CPJ0_STAES
PriA,primosomal protein
L3_108_031G1_scaffold_287_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3730..3933)
DNA (204bp) protein (68aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HPX7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54198.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_287_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4155..4643
DNA (489bp) protein (163aa)
Peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Peptide deformylase-like n=66 Tax=Staphylococcus epidermidis RepID=DEFL_STAEQ
L3_108_031G1_scaffold_287_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4636..5568
DNA (933bp) protein (311aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Methionyl-tRNA formyltransferase n=43 Tax=Staphylococcus epidermidis RepID=FMT_STAES
L3_108_031G1_scaffold_287_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5565..6872
DNA (1308bp) protein (436aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
RNA-binding Sun protein n=26 Tax=Staphylococcus epidermidis RepID=Q8CPI8_STAES
RNA-binding Sun protein
L3_108_031G1_scaffold_287_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6875..7969
DNA (1095bp) protein (365aa)
rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase (EC:2.1.1.192)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Probable dual-specificity RNA methyltransferase RlmN n=39 Tax=Staphylococcus epidermidis RepID=RLMN_STAES
L3_108_031G1_scaffold_287_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7976..8719
DNA (744bp) protein (248aa)
Protein phosphatase 2C n=39 Tax=Staphylococcus epidermidis RepID=C5Q8K6_STAEP
Protein serine/threonine phosphatase PrpC,regulation of stationary phase
Protein phosphatase 2C {ECO:0000313|EMBL:EFE59487.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_287_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8716..10719
DNA (2004bp) protein (668aa)
Protein kinase n=16 Tax=Staphylococcus epidermidis RepID=Q8CSV9_STAES
Serine/threonine protein kinase PrkC, regulator of stationary phase
Kinase domain protein {ECO:0000313|EMBL:EFE59486.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_287_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11013..11903
DNA (891bp) protein (297aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
GTPase n=1 Tax=Staphylococcus epidermidis RepID=UPI000003B78A
hypothetical protein
L3_108_031G1_scaffold_287_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11904..12548
DNA (645bp) protein (215aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribulose-phosphate 3-epimerase n=44 Tax=Staphylococcus epidermidis RepID=Q8CPI6_STAES
ribulose-phosphate 3-epimerase
L3_108_031G1_scaffold_287_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12553..13188
DNA (636bp) protein (212aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q8CSV7_STAES
hypothetical protein
Thiamine diphosphokinase {ECO:0000313|EMBL:ETJ12776.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Displaying 12 items

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