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L3_108_031G1_scaffold_301

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_301_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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211..1740
DNA (1530bp) protein (510aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Probable DEAD-box ATP-dependent RNA helicase SERP1688 n=28 Tax=Staphylococcus epidermidis RepID=Y1688_STAEQ
Cold-shock DEAD-box protein A
L3_108_031G1_scaffold_301_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1990..2469
DNA (480bp) protein (160aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=Q8CRP7_STAES
Hypothetical protein SAV2074
Uncharacterized protein {ECO:0000313|EMBL:EFE60126.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_301_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2456..3967
DNA (1512bp) protein (504aa)
Membrane protein, putative n=21 Tax=Staphylococcus epidermidis RepID=Q5HME2_STAEQ
Hypothetical protein, ydbT homolog
Membrane protein, putative {ECO:0000313|EMBL:AAW55049.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_301_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3954..4463
DNA (510bp) protein (170aa)
Uncharacterized protein n=30 Tax=Staphylococcus epidermidis RepID=Q5HME3_STAEQ
Hypothetical protein, ydbS homolog
Uncharacterized protein {ECO:0000313|EMBL:EFE60124.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_301_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4511..4864
DNA (354bp) protein (118aa)
Holo-[acyl-carrier protein] synthase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Holo-[acyl-carrier-protein] synthase n=31 Tax=Staphylococcus epidermidis RepID=ACPS_STAEQ
L3_108_031G1_scaffold_301_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4931..6079
DNA (1149bp) protein (383aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Alanine racemase n=31 Tax=Staphylococcus epidermidis RepID=ALR_STAEQ
L3_108_031G1_scaffold_301_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6166..6336
DNA (171bp) protein (57aa)
Antitoxin MazE n=81 Tax=Staphylococcus epidermidis RepID=MAZE_STAEQ
Programmed cell death antitoxin YdcD
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE60121.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_301_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6333..6695
DNA (363bp) protein (121aa)
Endoribonuclease MazF; EC=3.1.-.-;; Toxin MazF; mRNA interferase MazF; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
mRNA interferase MazF n=54 Tax=Staphylococcus epidermidis RepID=MAZF_STAEQ
Programmed cell death toxin YdcE
L3_108_031G1_scaffold_301_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7040..8041
DNA (1002bp) protein (334aa)
Sigma factor B regulator protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HME8_STAEQ
rsbU; sigma factor B regulator protein
Sigma factor B regulator protein {ECO:0000313|EMBL:AAW55036.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_301_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8141..8467
DNA (327bp) protein (109aa)
Anti-sigma-B factor antagonist n=78 Tax=Staphylococcus epidermidis RepID=RSBV_STAEQ
anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_301_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8469..8948
DNA (480bp) protein (160aa)
Serine-protein kinase rsbW (EC:2.7.11.1)
Serine-protein kinase RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00638};; Anti-sigma-B factor {ECO:0000256|HAMAP-Rule:MF_00638}; Sigma-B negative effector RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Serine-protein kinase RsbW n=64 Tax=Staphylococcus epidermidis RepID=RSBW_STAEQ
L3_108_031G1_scaffold_301_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8923..9693
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=34 Tax=Staphylococcus epidermidis RepID=Q5HMF1_STAEQ
RNA polymerase sigma factor SigB
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_301_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9981..12131
DNA (2151bp) protein (717aa)
S1 RNA binding domain protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HMF2_STAEQ
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EFE60115.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
S1 RNA-binding domain-containing protein
L3_108_031G1_scaffold_301_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12124..12387
DNA (264bp) protein (88aa)
Protein SprT-like n=10 Tax=Staphylococcus epidermidis RepID=F3TRJ2_STAEP
hypothetical protein
Protein SprT-like {ECO:0000256|HAMAP-Rule:MF_00745, ECO:0000256|SAAS:SAAS00012186}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Displaying 14 items

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