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L3_108_031G1_scaffold_362

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_362_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..543
DNA (543bp) protein (181aa)
Transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Transaldolase n=7 Tax=Staphylococcus epidermidis RepID=J0ERA9_STAEP
L3_108_031G1_scaffold_362_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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683..1126
DNA (444bp) protein (148aa)
Uncharacterized protein n=10 Tax=Staphylococcus epidermidis RepID=Q5HND4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59951.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_362_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1113..1556)
DNA (444bp) protein (148aa)
Uncharacterized protein n=54 Tax=Staphylococcus epidermidis RepID=Q5HND5_STAEQ
Hypothetical protein SAV1778
Uncharacterized protein {ECO:0000313|EMBL:EFE59952.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_362_4

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comp(1562..2041)
DNA (480bp) protein (160aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=Q8CS32_STAES
sigS; RNA polymerase sigma factor sigS
DNA-directed RNA polymerase sigma subunit RpoE {ECO:0000313|EMBL:ETJ20597.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_362_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2249..2464
DNA (216bp) protein (72aa)
Uncharacterized protein n=62 Tax=Staphylococcus epidermidis RepID=Q5HND8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59954.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_362_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2842..3693
DNA (852bp) protein (284aa)
Autolysin (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase, family 4 n=81 Tax=Staphylococcus epidermidis RepID=Q5HND9_STAEQ
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EFE59955.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_108_031G1_scaffold_362_7

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4041..5525
DNA (1485bp) protein (495aa)
Uncharacterized protein n=28 Tax=Staphylococcus epidermidis RepID=Q8CS35_STAES
Hypothetical protein SAV1772
Uncharacterized protein {ECO:0000313|EMBL:ETJ20594.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_108_031G1_scaffold_362_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5973..7004
DNA (1032bp) protein (344aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26)
Riboflavin biosynthesis protein RibD n=25 Tax=Staphylococcus epidermidis RepID=Q5HNE1_STAEQ
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_108_031G1_scaffold_362_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7011..7643
DNA (633bp) protein (211aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EFE59958.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EFE59958.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Riboflavin synthase alpha chain n=34 Tax=Staphylococcus epidermidis RepID=Q8CNU1_STAES
L3_108_031G1_scaffold_362_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7656..8837
DNA (1182bp) protein (394aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA {ECO:0000255|HAMAP-Rule:MF_01283}; Includes:; 3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01283}; Short=DHBP synthase {ECO:0000255|HAMAP-Rule:MF_01283};; EC=4.1.99.12 {ECO:0000255|HAMAP-Rule:MF_01283};; Includes:; GTP cyclohydrolase-2 {ECO:0000255|HAMAP-Rule:MF_01283}; EC=3.5.4.25 {ECO:0000255|HAMAP-Rule:MF_01283};; GTP cyclohydrolase II {ECO:0000255|HAMAP-Rule:MF_01283}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Riboflavin biosynthesis protein RibBA n=4 Tax=Staphylococcus epidermidis RepID=RIBBA_STAEQ
L3_108_031G1_scaffold_362_11

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8850..9311
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=39 Tax=Staphylococcus epidermidis RepID=RISB_STAEQ
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000313|EMBL:ETJ20590.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 11 items

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