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L3_108_031G1_scaffold_470

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_470_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(96..305)
DNA (210bp) protein (70aa)
Putative membrane protein insertion efficiency factor n=11 Tax=Clostridium perfringens RepID=YIDD_CLOP1
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_031G1_scaffold_470_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(277..654)
DNA (378bp) protein (126aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribonuclease P protein component n=11 Tax=Clostridium perfringens RepID=RNPA_CLOP1
L3_108_031G1_scaffold_470_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(715..849)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=11 Tax=Clostridium perfringens RepID=RL34_CLOP1
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_031G1_scaffold_470_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1746..3119
DNA (1374bp) protein (458aa)
Chromosomal replication initiator protein DnaA n=7 Tax=Clostridium perfringens RepID=DNAA_CLOP1
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_031G1_scaffold_470_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3414..4514
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
DNA polymerase III subunit beta n=11 Tax=Clostridium perfringens RepID=H7CRF2_CLOPF
L3_108_031G1_scaffold_470_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4640..4846
DNA (207bp) protein (69aa)
S4 domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CRF3_CLOPF
S4 domain-containing protein
S4 domain protein {ECO:0000313|EMBL:EDT22249.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_108_031G1_scaffold_470_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4902..5987
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=11 Tax=Clostridium perfringens RepID=RECF_CLOP1
recF; recombination protein F
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_031G1_scaffold_470_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5968..6261
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RTQ1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70221.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_108_031G1_scaffold_470_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6498..8243
DNA (1746bp) protein (582aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DNA gyrase subunit B n=8 Tax=Clostridium perfringens RepID=Q0TV59_CLOP1
L3_108_031G1_scaffold_470_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8265..8633
DNA (369bp) protein (123aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
DNA gyrase subunit A n=5 Tax=Clostridium perfringens RepID=B1RC00_CLOPF
Displaying 10 items

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