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L3_108_031G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_031G1_scaffold_18_1
unknown

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comp(1243..1377)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_108_031G1_scaffold_18_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1364..2035)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRK7_FILAD
CRISPR type II-A/NMEMI-associated protein Csn2 {ECO:0000313|EMBL:CRH76608.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_108_031G1_scaffold_18_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2032..2337)
DNA (306bp) protein (102aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=CAS2_FILAD
CRISPR-associated protein Cas2
L3_108_031G1_scaffold_18_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(2342..3220)
DNA (879bp) protein (293aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F299_9FIRM
CRISPR-associated protein Cas1
L3_108_031G1_scaffold_18_5
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3217..7302)
DNA (4086bp) protein (1362aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
CRISPR-associated protein, Csn1 family n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRK4_FILAD
CRISPR-associated protein, Csn1 family
L3_108_031G1_scaffold_18_6
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8037..9668)
DNA (1632bp) protein (544aa)
Cardiolipin synthase {ECO:0000313|EMBL:CRH71916.1}; EC=2.7.8.- {ECO:0000313|EMBL:CRH71916.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDE0_9FIRM
L3_108_031G1_scaffold_18_7
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9679..10614)
DNA (936bp) protein (312aa)
Diacylglycerol kinase {ECO:0000313|EMBL:CRH71915.1}; EC=2.7.1.107 {ECO:0000313|EMBL:CRH71915.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DYE5_9FIRM
hypothetical protein
L3_108_031G1_scaffold_18_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10619..11836)
DNA (1218bp) protein (406aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.-)
Aminotransferase class I and II n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCH7_9FIRM
Aminotransferase class I and II {ECO:0000313|EMBL:CDE37329.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_108_031G1_scaffold_18_9
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(12003..13583)
DNA (1581bp) protein (527aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GTF8_9FIRM
L3_108_031G1_scaffold_18_10
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

13843..14052
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H719_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH73619.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_108_031G1_scaffold_18_11
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14262..14405
DNA (144bp) protein (48aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH73618.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_108_031G1_scaffold_18_12
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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14556..15311
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZM88_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EPD77506.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
von Willebrand factor type A domain-containing protein
L3_108_031G1_scaffold_18_13
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(16502..17134)
DNA (633bp) protein (211aa)
RNA polymerase sigma factor n=3 Tax=Anaerostipes RepID=B0MA33_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CRH79107.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
RNA polymerase factor sigma-70
L3_108_031G1_scaffold_18_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(17184..17996)
DNA (813bp) protein (271aa)
4.2.3 {ECO:0000313|EMBL:CRH80113.1}; EC=2.1.1.- {ECO:0000313|EMBL:CRH80113.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8F8_9FIRM
L3_108_031G1_scaffold_18_15
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(17999..18469)
DNA (471bp) protein (157aa)
Mini-ribonuclease 3 {ECO:0000313|EMBL:CRH80114.1}; EC=3.1.26.- {ECO:0000313|EMBL:CRH80114.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Mini-ribonuclease 3 n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JA12_9FIRM
ribonuclease III
L3_108_031G1_scaffold_18_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(18454..19875)
DNA (1422bp) protein (474aa)
Cysteine--tRNA ligase {ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|SAAS:SAAS00043714};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Cysteine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQQ7_9FIRM
cysteinyl-tRNA synthetase
L3_108_031G1_scaffold_18_17
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19927..20616)
DNA (690bp) protein (230aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Serine acetyltransferase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3N4_EUBE2
serine O-acetyltransferase
L3_108_031G1_scaffold_18_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20637..21104)
DNA (468bp) protein (156aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B777A5
L3_108_031G1_scaffold_18_19
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(21269..25147)
DNA (3879bp) protein (1293aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F5F6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF01455.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
cell wall/surface repeat protein
L3_108_031G1_scaffold_18_20
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25647..27143)
DNA (1497bp) protein (499aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Amidophosphoribosyltransferase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3J9_EUBE2
amidophosphoribosyltransferase
L3_108_031G1_scaffold_18_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27333..27842
DNA (510bp) protein (170aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6JQK3_9FIRM
hypothetical protein
L3_108_031G1_scaffold_18_22
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27839..28705)
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DVX9_9FIRM
dimethyladenosine transferase
L3_108_031G1_scaffold_18_23
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(28708..29487)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QHX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ28223.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
TatD family hydrolase
L3_108_031G1_scaffold_18_24
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29714..33757
DNA (4044bp) protein (1348aa)
Putative methyl-coenzyme M reductase, alpha subunit n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRH9_9FIRM
Putative methyl-coenzyme M reductase, alpha subunit {ECO:0000313|EMBL:EFD05269.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Bacterial Ig-like domain (group 3).
L3_108_031G1_scaffold_18_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33838..35838)
DNA (2001bp) protein (667aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC21_9FIRM
L3_108_031G1_scaffold_18_26
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(35882..36664)
DNA (783bp) protein (261aa)
Molecular chaperone DnaJ n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E8C6_9FIRM
Chaperone protein DnaJ {ECO:0000313|EMBL:CRH74209.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
molecular chaperone DnaJ
L3_108_031G1_scaffold_18_27
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(36675..37541)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DVZ7_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH74210.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_108_031G1_scaffold_18_28
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(37543..37719)
DNA (177bp) protein (59aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH74211.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_108_031G1_scaffold_18_29
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(37736..38374)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P4I2_9FIRM
IMPACT family member yigZ {ECO:0000313|EMBL:CRH74212.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
X-Pro dipeptidase
L3_108_031G1_scaffold_18_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38378..39526)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37238.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
Displaying items 1-30 of 128 in total

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