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L3_108_039G1_scaffold_3

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Displaying items 1-30 of 390 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_039G1_scaffold_3_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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391..3645
DNA (3255bp) protein (1085aa)
Helicase, SNF2/RAD54 family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVY8_CLOPF
Helicase, SNF2/RAD54 family {ECO:0000313|EMBL:EDT14135.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
helicase, SNF2/RAD54 family
L3_108_039G1_scaffold_3_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4071..5996)
DNA (1926bp) protein (642aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TPX9_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81330.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_3_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6318..6983)
DNA (666bp) protein (222aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens F262 RepID=H7CX04_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EIA16905.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lipoprotein
L3_108_039G1_scaffold_3_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7125..8108
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVZ0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14162.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_3_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8377..9183
DNA (807bp) protein (269aa)
Cation efflux family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVZ1_CLOPF
Cation efflux family protein {ECO:0000313|EMBL:EDT14127.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_3_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9265..9735)
DNA (471bp) protein (157aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CX01_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16902.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_108_039G1_scaffold_3_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10261..12552
DNA (2292bp) protein (764aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRL4_CLOPF
ATP-dependent DNA helicase UvrD
L3_108_039G1_scaffold_3_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12569..12826
DNA (258bp) protein (86aa)
UPF0473 protein CPR_1590 n=11 Tax=Clostridium perfringens RepID=Y1590_CLOPS
hypothetical protein
UPF0473 protein AC3_2096 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_3_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12842..13237
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRL2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16898.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_039G1_scaffold_3_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13711..13899)
DNA (189bp) protein (63aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWZ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14158.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_3_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14050..14262
DNA (213bp) protein (71aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BGI4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14119.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_3_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14465..15790
DNA (1326bp) protein (442aa)
Peptidase, M23/M37 family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWZ4_CLOPF
Peptidase, M23/M37 family protein {ECO:0000313|EMBL:EIA16895.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
cell wall-binding protein
L3_108_039G1_scaffold_3_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15919..16284
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BGI2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81188.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_039G1_scaffold_3_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16358..17011)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRK7_CLOPF
DedA family membrane protein
Membrane protein, DedA family {ECO:0000313|EMBL:EDT14134.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_3_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17114..17383
DNA (270bp) protein (90aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWZ1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16892.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_039G1_scaffold_3_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17620..18603
DNA (984bp) protein (328aa)
Polysaccharide deacetylase family protein n=2 Tax=Clostridium perfringens RepID=H7CWZ0_CLOPF
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EIA16891.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
polysaccharide deacetylase
L3_108_039G1_scaffold_3_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18642..18941)
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CWY9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16890.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_039G1_scaffold_3_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19091..19738
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGH7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81115.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_108_039G1_scaffold_3_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19814..20257
DNA (444bp) protein (148aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
msrB; methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB n=3 Tax=Clostridium perfringens RepID=H7CWY7_CLOPF
L3_108_039G1_scaffold_3_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20315..20623
DNA (309bp) protein (103aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=B1BGH5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27054.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_039G1_scaffold_3_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20666..21472
DNA (807bp) protein (269aa)
GTP pyrophosphokinase homolog n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4U4_CLOPF
GTP pyrophosphokinase homolog {ECO:0000313|EMBL:EDT71183.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
GTP pyrophosphokinase-like protein
L3_108_039G1_scaffold_3_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21806..23506
DNA (1701bp) protein (567aa)
Transporter, major facilitator family n=3 Tax=Clostridium perfringens RepID=B1BXK4_CLOPF
Transporter, major facilitator family {ECO:0000313|EMBL:EDT13576.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
major facilitator family transporter
L3_108_039G1_scaffold_3_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23724..23975
DNA (252bp) protein (84aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRJ8_CLOPF
thiS; thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDT27102.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_039G1_scaffold_3_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24051..24860
DNA (810bp) protein (270aa)
Probable molybdopterin biosynthesis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK01_CLOPE
thiamine biosynthesis protein ThiF
Probable molybdopterin biosynthesis protein {ECO:0000313|EMBL:BAB81308.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_3_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24975..25739
DNA (765bp) protein (255aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Thiazole synthase n=5 Tax=Clostridium perfringens RepID=THIG_CLOPS
thiG; thiazole synthase
L3_108_039G1_scaffold_3_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25752..26855
DNA (1104bp) protein (368aa)
Thiamin biosynthesis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK03_CLOPE
thiH; thiamine biosynthesis protein ThiH
Thiamin biosynthesis protein {ECO:0000313|EMBL:BAB81306.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_3_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26890..27471
DNA (582bp) protein (194aa)
Thiamin phosphate pyrophosphorylase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK04_CLOPE
thiE; thiamine monophosphate synthase
Thiamin phosphate pyrophosphorylase {ECO:0000313|EMBL:BAB81305.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_3_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27583..28011
DNA (429bp) protein (143aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CWX8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13584.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_3_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28183..28734
DNA (552bp) protein (184aa)
RNA polymerase sigma factor SigW (Sigma-W factor) n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGG6_CLOPF
RNA polymerase sigma factor SigW (Sigma-W factor) {ECO:0000313|EMBL:EDS81163.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ECF subfamily RNA polymerase sigma-24 factor
L3_108_039G1_scaffold_3_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28735..30099
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGG5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81196.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Displaying items 1-30 of 390 in total

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