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L3_108_039G1_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 257 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_039G1_scaffold_6_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

239..841
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor, ECF family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R585_CLOPF
RNA polymerase sigma-70 factor, ECF family {ECO:0000313|EMBL:EDT24581.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ECF subfamily RNA polymerase sigma factor
L3_108_039G1_scaffold_6_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

816..1598
DNA (783bp) protein (261aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQF7_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT16071.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_6_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1592..2464
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQF8_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT16155.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATP-binding protein
L3_108_039G1_scaffold_6_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2469..3740
DNA (1272bp) protein (424aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQF9_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT16197.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_6_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3775..4923
DNA (1149bp) protein (383aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TS48_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS80047.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_039G1_scaffold_6_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5122..5673)
DNA (552bp) protein (184aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCP4_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT28092.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_039G1_scaffold_6_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5907..6257)
DNA (351bp) protein (117aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TS46_CLOP1
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
L3_108_039G1_scaffold_6_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6518..6637)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQG2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16128.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_6_9
unknown

Not on your lists

comp(7581..7706)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RME5_CLOPF
L3_108_039G1_scaffold_6_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7756..9036)
DNA (1281bp) protein (427aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RME4_CLOPF
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein {ECO:0000313|EMBL:ABG87709.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_039G1_scaffold_6_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9051..9398)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=C6UAS3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU40895.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_039G1_scaffold_6_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9395..9727)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RME3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87039.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_039G1_scaffold_6_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9743..10432)
DNA (690bp) protein (230aa)
Glycosyltransferase YcbB n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RME2_CLOPF
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AJH00805.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_108_039G1_scaffold_6_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10799..10906)
DNA (108bp) protein (36aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CUL3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16186.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_6_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12027..12335
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RME0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16112.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_6_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12579..14042
DNA (1464bp) protein (488aa)
Sulfatase n=1 Tax=Clostridium perfringens F262 RepID=H7CUL5_CLOPF
Sulfatase {ECO:0000313|EMBL:EIA17737.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
sulfatase
L3_108_039G1_scaffold_6_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14293..14982)
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CUL6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17738.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_108_039G1_scaffold_6_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15180..17102
DNA (1923bp) protein (641aa)
Glycosyl hydrolase, family 20 n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R595_CLOPF
Glycosyl hydrolase, family 20 {ECO:0000313|EMBL:EDT24526.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
glycosyl hydrolase
L3_108_039G1_scaffold_6_19
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17173..17427
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IXD2_DESMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFQ43361.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L3_108_039G1_scaffold_6_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17708..17929
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUC4_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87503.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_039G1_scaffold_6_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18379..18843
DNA (465bp) protein (155aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=B1BJG3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24533.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_108_039G1_scaffold_6_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18985..19407
DNA (423bp) protein (141aa)
MarR family transcriptional regulator n=6 Tax=Clostridium perfringens RepID=H7CUM1_CLOPF
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT28301.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
MarR family transcriptional regulator
L3_108_039G1_scaffold_6_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19575..20252
DNA (678bp) protein (226aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CUM2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14986.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_6_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20427..21161
DNA (735bp) protein (245aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CUM3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28276.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_108_039G1_scaffold_6_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21486..22040
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CUM4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17746.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_039G1_scaffold_6_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22279..23313)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPS7_CLOPF
Acyltransferase family protein {ECO:0000313|EMBL:EIA17747.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
acyltransferase
L3_108_039G1_scaffold_6_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23598..25118
DNA (1521bp) protein (507aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCM9_CLOPF
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDT28150.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
AraC family transcriptional regulator
L3_108_039G1_scaffold_6_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25136..26863
DNA (1728bp) protein (576aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJF6_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EDS80085.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sensor histidine kinase
L3_108_039G1_scaffold_6_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27145..28404
DNA (1260bp) protein (420aa)
Sugar ABC transporter, sugar-binding protein n=4 Tax=Clostridium perfringens RepID=H7CUM8_CLOPF
sugar ABC transporter sugar-binding protein
Sugar ABC transporter, sugar-binding protein {ECO:0000313|EMBL:EIA17750.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_039G1_scaffold_6_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28492..29397
DNA (906bp) protein (302aa)
Sugar ABC transporter, permease protein n=5 Tax=Clostridium perfringens RepID=Q0TS30_CLOP1
sugar ABC transporter permease
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EDT28330.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying items 1-30 of 257 in total

View Taxonomy