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L3_108_039G1_scaffold_16

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Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_039G1_scaffold_16_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(639..1430)
DNA (792bp) protein (264aa)
Tol-pal system protein YbgF n=276 Tax=Escherichia RepID=D5CXV0_ECOKI
ygbF; tol-pal system protein YbgF
Uncharacterized protein {ECO:0000313|EMBL:ABE06232.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_108_039G1_scaffold_16_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1440..1961)
DNA (522bp) protein (174aa)
Peptidoglycan-associated lipoprotein n=378 Tax=Escherichia RepID=E2QIB4_ECOLX
pal; peptidoglycan-associated outer membrane lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ABE06231.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_108_039G1_scaffold_16_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1996..3288)
DNA (1293bp) protein (431aa)
Protein TolB n=1345 Tax=Enterobacteriaceae RepID=TOLB_ECO24
tolB; Translocation protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L3_108_039G1_scaffold_16_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3421..4671)
DNA (1251bp) protein (417aa)
tolA; cell envelope integrity inner membrane protein TolA (EC:3.6.3.14)
Membrane spanning protein TolA n=70 Tax=Escherichia RepID=A1A8Y9_ECOK1
Cell envelope integrity inner membrane protein TolA {ECO:0000313|EMBL:CKH91100.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_16_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4736..5164)
DNA (429bp) protein (143aa)
Protein TolR n=1326 Tax=Enterobacteriaceae RepID=TOLR_ECO57
colicin uptake protein TolR
Protein TolR {ECO:0000313|EMBL:EFJ71674.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_108_039G1_scaffold_16_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5168..5860)
DNA (693bp) protein (231aa)
Protein tolQ n=393 Tax=Escherichia RepID=E2QIB0_ECOLX
tolQ; protein TolQ
Protein TolQ {ECO:0000313|EMBL:EGI16767.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_108_039G1_scaffold_16_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5857..6261)
DNA (405bp) protein (135aa)
Acyl-CoA thioester hydrolase YbgC n=1300 Tax=Enterobacteriaceae RepID=YBGC_ECO57
acyl-CoA thioester hydrolase YbgC
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:ESD68701.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L3_108_039G1_scaffold_16_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6411..6704)
DNA (294bp) protein (98aa)
Uncharacterized protein YbgE n=1326 Tax=Enterobacteriaceae RepID=YBGE_ECO57
hypothetical protein
Cyd operon protein YbgE {ECO:0000313|EMBL:EGI47207.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_108_039G1_scaffold_16_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6704..6817)
DNA (114bp) protein (38aa)
Cytochrome bd-I ubiquinol oxidase subunit X n=1419 Tax=Enterobacteriaceae RepID=CYDX_ECOLI
ybgT; cyd operon protein YbgT
Cyd operon protein YbgT {ECO:0000313|EMBL:EFJ84752.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_108_039G1_scaffold_16_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6832..7971)
DNA (1140bp) protein (380aa)
Cytochrome bd-I ubiquinol oxidase subunit 2 n=1361 Tax=Enterobacteriaceae RepID=CYDB_ECO57
cydB; cytochrome d ubiquinol oxidase subunit 2
Cytochrome d ubiquinol oxidase subunit 2 {ECO:0000313|EMBL:ESP10406.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_108_039G1_scaffold_16_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7987..9555)
DNA (1569bp) protein (523aa)
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:KDY61265.1}; EC=1.10.3.- {ECO:0000313|EMBL:KDY61265.1};; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
Cytochrome bd-I ubiquinol oxidase subunit 1 n=1270 Tax=Enterobacteriaceae RepID=CYDA_ECOL6
L3_108_039G1_scaffold_16_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10659..10931)
DNA (273bp) protein (91aa)
Uncharacterized protein n=77 Tax=Escherichia RepID=Q1REJ5_ECOUT
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH90842.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_16_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10885..12000)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=93 Tax=Escherichia RepID=B7MFY5_ECO45
TPR domain-containing protein
TPR domain-containing protein {ECO:0000313|EMBL:CKH90819.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_16_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12240..13109)
DNA (870bp) protein (290aa)
sucD; succinate-CoA ligase, alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1324 Tax=Enterobacteriaceae RepID=SUCD_ECO57
L3_108_039G1_scaffold_16_15
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13109..14275)
DNA (1167bp) protein (389aa)
sucC; Succinyl-CoA ligase (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1331 Tax=Enterobacteriaceae RepID=SUCC_ECO24
L3_108_039G1_scaffold_16_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14369..15586)
DNA (1218bp) protein (406aa)
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61 {ECO:0000313|EMBL:CAR06902.1};; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
Dihydrolipoyllysine-residue succinyltransferase component n=119 Tax=Escherichia RepID=E2QIA0_ECOLX
L3_108_039G1_scaffold_16_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15601..18402)
DNA (2802bp) protein (934aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1176 Tax=Enterobacteriaceae RepID=ODO1_ECO57
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EQY33676.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L3_108_039G1_scaffold_16_18
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18763..19479)
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinate dehydrogenase n=1180 Tax=Enterobacteriaceae RepID=C3TIN2_ECOLX
L3_108_039G1_scaffold_16_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19495..21261)
DNA (1767bp) protein (589aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Succinate dehydrogenase flavoprotein subunit n=1198 Tax=Enterobacteriaceae RepID=DHSA_ECO57
L3_108_039G1_scaffold_16_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21261..21608)
DNA (348bp) protein (116aa)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6
sdhD; succinate dehydrogenase cytochrome b556 small subunit
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:EOV80348.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_108_039G1_scaffold_16_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21602..22006)
DNA (405bp) protein (135aa)
sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit (EC:1.3.5.1)
Succinate dehydrogenase cytochrome b556 large membrane subunit {ECO:0000313|EMBL:CKH90505.1}; EC=1.3.5.1 {ECO:0000313|EMBL:CKH90505.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Succinate dehydrogenase cytochrome b-556 subunit n=86 Tax=Escherichia RepID=A1A8X4_ECOK1
L3_108_039G1_scaffold_16_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22387..22494
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli O81 (strain ED1a) RepID=B7MPL4_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN32150.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_108_039G1_scaffold_16_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22700..23983
DNA (1284bp) protein (428aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=1084 Tax=Enterobacteriaceae RepID=CISY_ECOL6
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L3_108_039G1_scaffold_16_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24131..24505
DNA (375bp) protein (125aa)
Uncharacterized protein n=288 Tax=Escherichia RepID=E1RY71_ECOUM
ybgO; hypothetical protein
Putative fimbrial protein {ECO:0000313|EMBL:CKH90457.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_16_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24657..25703
DNA (1047bp) protein (349aa)
Protein abrB n=327 Tax=Escherichia RepID=E2QI92_ECOLX
abrB; transport protein AbrB
Membrane AbrB duplication domain protein {ECO:0000313|EMBL:EHU43989.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L3_108_039G1_scaffold_16_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25700..26491)
DNA (792bp) protein (264aa)
Endonuclease 8 n=112 Tax=Escherichia RepID=END8_ECO45
nei; endonuclease VIII
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_108_039G1_scaffold_16_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26527..27261)
DNA (735bp) protein (245aa)
UPF0271 protein YbgL n=131 Tax=Escherichia RepID=YBGL_ECO27
ybgL; LamB/YcsF family protein
UPF0271 protein YbgL {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_108_039G1_scaffold_16_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27251..28183)
DNA (933bp) protein (311aa)
Allophanate hydrolase, subunit 2 n=286 Tax=Escherichia RepID=D5CXE3_ECOKI
ybgK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU62383.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_108_039G1_scaffold_16_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28177..28833)
DNA (657bp) protein (219aa)
Allophanate hydrolase, subunit 1 n=130 Tax=Escherichia RepID=D5CXE2_ECOKI
ybgJ; putative hydrolase subunit
Carboxylase {ECO:0000313|EMBL:ELJ75696.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_108_039G1_scaffold_16_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28856..29599)
DNA (744bp) protein (248aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Putative GTP cyclohydrolase 1 type 2 n=1216 Tax=Enterobacteriaceae RepID=GTPC1_ECO57
ybgI; metal-binding protein
Displaying items 1-30 of 156 in total

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