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L3_108_039G1_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_039G1_scaffold_23_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(358..1320)
DNA (963bp) protein (321aa)
Putative DNA replication protein DnaC n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V623_CLOPF
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EDT70758.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
dnaC; DNA replication protein DnaC
L3_108_039G1_scaffold_23_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1281..2339)
DNA (1059bp) protein (353aa)
DnaD and phage-associated domain-containing protein n=10 Tax=Clostridium perfringens RepID=H1CVU2_CLOPF
DNA replication protein DnaD
Putative DNA replication protein DnaD {ECO:0000313|EMBL:EDT25797.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_039G1_scaffold_23_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2582..3634
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XH74_CLOPE
M23/M37 family peptidase
Uncharacterized protein {ECO:0000313|EMBL:BAB82317.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_23_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3637..4833)
DNA (1197bp) protein (399aa)
Subtilase family protein n=2 Tax=Clostridium perfringens RepID=B1RJP8_CLOPF
subtilase family protein
Subtilase family protein {ECO:0000313|EMBL:EDT25800.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_039G1_scaffold_23_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4900..5331)
DNA (432bp) protein (144aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1R6C2_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT24255.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_108_039G1_scaffold_23_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5387..5866)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZW7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15742.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_108_039G1_scaffold_23_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6063..6608)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZW6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15741.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_108_039G1_scaffold_23_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6948..8201
DNA (1254bp) protein (418aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 n=9 Tax=Clostridium perfringens RepID=MURA2_CLOPE
L3_108_039G1_scaffold_23_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8224..9015
DNA (792bp) protein (264aa)
Metallo-beta-lactamase family protein n=5 Tax=Clostridium perfringens RepID=H7CZW4_CLOPF
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EIA15739.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
metallo-beta-lactamase
L3_108_039G1_scaffold_23_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9031..9585
DNA (555bp) protein (185aa)
Putative lipoprotein n=8 Tax=Clostridium perfringens RepID=H7CZW3_CLOPF
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT13674.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_039G1_scaffold_23_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9729..10229
DNA (501bp) protein (167aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZW2_CLOPF
hypothetical protein
SEC-C domain protein {ECO:0000313|EMBL:ABG86775.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_039G1_scaffold_23_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10336..10977
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVT2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15736.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_039G1_scaffold_23_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11207..11578
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BET1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25798.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_108_039G1_scaffold_23_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11830..12309
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Ribosomal RNA large subunit methyltransferase H 1 n=8 Tax=Clostridium perfringens RepID=RLMH1_CLOPS
rRNA large subunit methyltransferase
L3_108_039G1_scaffold_23_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12561..13085
DNA (525bp) protein (175aa)
Hydrolase, isochorismatase family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R790_CLOPF
Hydrolase, isochorismatase family {ECO:0000313|EMBL:EDT23893.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
isochorismatase hydrolase
L3_108_039G1_scaffold_23_16
unknown

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13249..13341
DNA (93bp) protein (31aa)

This feature has no annotations

L3_108_039G1_scaffold_23_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13466..14425
DNA (960bp) protein (320aa)
Adenosine deaminase {ECO:0000313|EMBL:EHI99962.1}; EC=3.5.4.4 {ECO:0000313|EMBL:EHI99962.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
putative adenosine/adenine deaminase (EC:3.5.4.-)
Adenosine deaminase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M186_9CLOT
L3_108_039G1_scaffold_23_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14760..15650)
DNA (891bp) protein (297aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RR72_CLOPF
oxidoreductase
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT25806.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_039G1_scaffold_23_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15916..16284
DNA (369bp) protein (123aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XH89_CLOPE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS81684.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_039G1_scaffold_23_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16411..17442
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1RR67_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70738.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_108_039G1_scaffold_23_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17579..18385
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RR66_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24321.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_108_039G1_scaffold_23_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18599..18937
DNA (339bp) protein (113aa)
PhnA family protein n=9 Tax=Clostridium perfringens RepID=H7CZU8_CLOPF
phnA family protein
PhnA family protein {ECO:0000313|EMBL:EDT70746.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_108_039G1_scaffold_23_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19289..21454
DNA (2166bp) protein (722aa)
Putative phage infection protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXX3_CLOPF
Putative phage infection protein {ECO:0000313|EMBL:EDT13453.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage infection protein
L3_108_039G1_scaffold_23_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21477..23633
DNA (2157bp) protein (719aa)
Probable phage infection protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XH95_CLOPE
phage infection protein
Probable phage infection protein {ECO:0000313|EMBL:BAB82296.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_23_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23761..25245
DNA (1485bp) protein (495aa)
N-6 DNA methylase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXX5_CLOPF
N-6 DNA methylase {ECO:0000313|EMBL:EDT13457.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
N-6 DNA methylase
L3_108_039G1_scaffold_23_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25247..25720)
DNA (474bp) protein (158aa)
msrA; methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000255|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000255|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01401}; Short=Peptide Met(O) reductase {ECO:0000255|HAMAP-Rule:MF_01401};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Clostridium perfringens RepID=MSRA_CLOP1
L3_108_039G1_scaffold_23_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25772..26359)
DNA (588bp) protein (196aa)
Maltose transacetylase {ECO:0000313|EMBL:EDT13449.1}; EC=2.3.1.79 {ECO:0000313|EMBL:EDT13449.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
maa; maltose transacetylase (EC:2.3.1.79)
Maltose transacetylase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXX7_CLOPF
L3_108_039G1_scaffold_23_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26493..27281
DNA (789bp) protein (263aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=B1BEQ2_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT13455.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_039G1_scaffold_23_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27320..28597)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHA0_CLOPE
nucleoside recognition domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82291.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_039G1_scaffold_23_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28974..30623
DNA (1650bp) protein (550aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Hydroxylamine reductase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R696_CLOPF
hydroxylamine reductase
Displaying items 1-30 of 139 in total

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